Q9FPH3 (Q9FPH3_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
AT3g04520 EMBL AAG40385.1

Submitted name:
L-allo-threonine aldolase like protein EMBL BAD43108.1
Submitted name:
L-allo-threonine aldolase, putative EMBL AAM62682.1
Submitted name:
Putative L-allo-threonine aldolase EMBL AAM14044.1
Submitted name:
Threonine aldolase 2 EMBL AEE74091.1

Gene names

Name:	AT3g04520/T27C4_17 EMBL AAG40385.1
Synonyms:	THA2 EMBL AEE74091.1
Ordered Locus Names:	At3g04520 TAIR At3g04520
ORF Names:	AT3G04520 EMBL AEE74091.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAG40385.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	threonine catabolic process Inferred from mutant phenotype PubMed 17172352. Source: TAIR
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro threonine aldolase activity Inferred from direct assay PubMed 17172352. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FPH3 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: D7D1EFDBA18B517E	FASTA	355	38,252
	10 20 30 40 50 60 MVTPTTIRTV DLRSDTVTKP TESMRSAMAN AEVDDDVLGN DPTALRLEKE VAEIAGKEAA 70 80 90 100 110 120 MFVPSGTMGN LISVLVHCDE RGSEVILGDD SHIHIYENGG VSSLGGVHPR TVKNEEDGTM 130 140 150 160 170 180 EIGAIEAAVR SPKGDLHHPV TKLICLENTQ ANCGGRCLPI EYIDKVGELA KKHGLKLHID 190 200 210 220 230 240 GARIFNASVA LGVPVKRIVQ AADSVSICLS KGIGAPVGSV IVGSKKFITK ARWLRKTLGG 250 260 270 280 290 300 GMRQIGVLCA AALVALHENV AKLEDDHKKA RVLAEGLNRI ERLRVNVAAV ETNIIYVDIP 310 320 330 340 350 EDPKFGAEEA CKSLEDVGVL VIPQATFRIR IVLHHQISDV DVEYVLSCFE KIFHS

References

[1]	"Arabidopsis cDNA clones." Shinn P., Chao Q., Brooks S., Chen H., Cheuk R., Johnson-Hopson C., Khan S., Kim C.J., Banh J., Bowser L., Chung M.K., Goldsmith A.D., Jones T., Karlin-Neumann G., Lam B., Lee J.M., Lin J., Liu S.X. , Miranda M., Nguyen M., Palm C.J., Pham P.K., Quach H.L., Sakano H., Southwick A., Toriumi M., Yamada K., Yu G., Davis R.W., Theologis A., Ecker J.R. Submitted (MAR-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Arabidopsis Full Length cDNA Clones." Yamada K., Banh J., Chan M.M., Chang C.H., Chang E., Dale J.M., Deng J.M., Goldsmith A.D., Lee J.M., Onodera C.S., Quach H.L., Tang C., Toriumi M., Wu H.C., Yamamura Y., Yu G., Bowser L., Carninci P. , Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Meyers M.C., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[4]	Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Arabidopsis Open Reading Frame (ORF) Clones." Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C., Toriumi M., Wu H.C., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., ishida J. , Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A. Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K., Akiyama K. , Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (SEP-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	"Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE.
[8]	Arabidopsis TAIR10 Release Swarbreck D., Lamesch P., Wilks C., Huala E. Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[9]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF325033 mRNA. Translation: AAG40385.1. AY091093 mRNA. Translation: AAM14044.1. AY085456 mRNA. Translation: AAM62682.1. AY123033 mRNA. Translation: AAM67566.1. CP002686 Genomic DNA. Translation: AEE74091.1. AK175345 mRNA. Translation: BAD43108.1.
IPI	IPI00536006.
RefSeq	NP_566228.1. NM_111323.3.
UniGene	At.19145.
3D structure databases
HSSP	HSSP built from PDB template 1JG8 based on UniProtKB Q9X266.
SMR	Q9FPH3. Positions 10-353.
ModBase	Search...
Protein-protein interaction databases
STRING	3702.AT3G04520.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT3G04520.1; AT3G04520.1; AT3G04520.
GeneID	819608.
KEGG	ath:AT3G04520.
Organism-specific databases
TAIR	At3g04520.
Phylogenomic databases
eggNOG	COG2008.
InParanoid	Q9FPH3.
KO	K01620.
OMA	VHCRPGD.
ProtClustDB	PLN02721.
Enzyme and pathway databases
BRENDA	2.1.2.1. 302.
Gene expression databases
Genevestigator	Q9FPH3.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR001597. ArAA_b-elim_lyase/Thr_aldolase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. IPR023603. Threonine_aldolase. [Graphical view]
Pfam	PF01212. Beta_elim_lyase. 1 hit. [Graphical view]
PIRSF	PIRSF017617. Thr_aldolase. 1 hit.
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9FPH3_ARATH

Accession

Primary (citable) accession number: Q9FPH3

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 74 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)