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Q9FNZ5

- NIMI1_ARATH

UniProt

Q9FNZ5 - NIMI1_ARATH

Protein

Protein NIM1-INTERACTING 1

Gene

NIMIN-1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. protein binding Source: IntAct

    GO - Biological processi

    1. defense response to bacterium Source: TAIR
    2. negative regulation of transcription, DNA-templated Source: TAIR
    3. regulation of systemic acquired resistance Source: TAIR

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein NIM1-INTERACTING 1
    Short name:
    Protein NIMIN-1
    Gene namesi
    Name:NIMIN-1
    Ordered Locus Names:At1g02450
    ORF Names:T14P4.19, T6A9_28
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 1

    Organism-specific databases

    TAIRiAT1G02450.

    Subcellular locationi

    Nucleus 1 Publication

    GO - Cellular componenti

    1. nucleus Source: TAIR

    Keywords - Cellular componenti

    Nucleus

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 142142Protein NIM1-INTERACTING 1PRO_0000407996Add
    BLAST

    Proteomic databases

    PRIDEiQ9FNZ5.

    Expressioni

    Inductioni

    By salicylic acid (SA) and BTH.1 Publication

    Gene expression databases

    GenevestigatoriQ9FNZ5.

    Interactioni

    Subunit structurei

    Interacts with NPR1.1 Publication

    Binary interactionsi

    WithEntry#Exp.IntActNotes
    NPR1Q8L9W45EBI-541099,EBI-541093

    Protein-protein interaction databases

    BioGridi23040. 3 interactions.
    IntActiQ9FNZ5. 6 interactions.
    STRINGi3702.AT1G02450.1-P.

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni47 – 537Involved in NPR1/NIM1 interaction

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili110 – 14132Sequence AnalysisAdd
    BLAST

    Motif

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Motifi60 – 645Nuclear localization signalSequence Analysis

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi36 – 438Poly-Glu

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiNOG313903.
    HOGENOMiHOG000152574.
    InParanoidiQ9FNZ5.
    OMAiTEERNED.

    Sequencei

    Sequence statusi: Complete.

    Q9FNZ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MYPKQFSLYN YSLETMSKDE NVESKETIRV DKRVREDEEE EEEKKIDTFF    50
    KLIKHYQEAR KRRREELAEN SGVVRRKSNG GERSGIVVPA FQPEDFSQCR 100
    TGLKPPLMFV SDHKEENTKV EQEEDQTEER NEDKALDLNL AL 142
    Length:142
    Mass (Da):16,818
    Last modified:March 1, 2001 - v1
    Checksum:i5C8EB7C4A7064B65
    GO

    Sequence cautioni

    The sequence AAG10641.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ250184 mRNA. Translation: CAC19844.1.
    AC022521 Genomic DNA. Translation: AAG10641.1. Different initiation.
    AC064879 Genomic DNA. No translation available.
    CP002684 Genomic DNA. Translation: AEE27431.1.
    AK119149 mRNA. Translation: BAC43719.1.
    BT003662 mRNA. Translation: AAO39890.1.
    PIRiA86155.
    RefSeqiNP_563653.2. NM_100126.3.
    UniGeneiAt.10196.

    Genome annotation databases

    EnsemblPlantsiAT1G02450.1; AT1G02450.1; AT1G02450.
    GeneIDi837800.
    KEGGiath:AT1G02450.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AJ250184 mRNA. Translation: CAC19844.1 .
    AC022521 Genomic DNA. Translation: AAG10641.1 . Different initiation.
    AC064879 Genomic DNA. No translation available.
    CP002684 Genomic DNA. Translation: AEE27431.1 .
    AK119149 mRNA. Translation: BAC43719.1 .
    BT003662 mRNA. Translation: AAO39890.1 .
    PIRi A86155.
    RefSeqi NP_563653.2. NM_100126.3.
    UniGenei At.10196.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 23040. 3 interactions.
    IntActi Q9FNZ5. 6 interactions.
    STRINGi 3702.AT1G02450.1-P.

    Proteomic databases

    PRIDEi Q9FNZ5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT1G02450.1 ; AT1G02450.1 ; AT1G02450 .
    GeneIDi 837800.
    KEGGi ath:AT1G02450.

    Organism-specific databases

    TAIRi AT1G02450.

    Phylogenomic databases

    eggNOGi NOG313903.
    HOGENOMi HOG000152574.
    InParanoidi Q9FNZ5.
    OMAi TEERNED.

    Gene expression databases

    Genevestigatori Q9FNZ5.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "NIMIN-1, NIMIN-2 and NIMIN-3, members of a novel family of proteins from Arabidopsis that interact with NPR1/NIM1, a key regulator of systemic acquired resistance in plants."
      Weigel R.R., Baeuscher C., Pfitzner A.J.P., Pfitzner U.M.
      Plant Mol. Biol. 46:143-160(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], INTERACTION WITH NPR1, INDUCTION, SUBCELLULAR LOCATION.
      Strain: cv. Columbia.
    2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
      Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
      , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
      Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.

    Entry informationi

    Entry nameiNIMI1_ARATH
    AccessioniPrimary (citable) accession number: Q9FNZ5
    Secondary accession number(s): Q9FWX4
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 3, 2011
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names

    External Data

    Dasty 3