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Q9FNZ5

- NIMI1_ARATH

UniProt

Q9FNZ5 - NIMI1_ARATH

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Protein
Protein NIM1-INTERACTING 1
Gene
NIMIN-1, At1g02450, T14P4.19, T6A9_28
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct

GO - Biological processi

  1. defense response to bacterium Source: TAIR
  2. negative regulation of transcription, DNA-templated Source: TAIR
  3. regulation of systemic acquired resistance Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NIM1-INTERACTING 1
Short name:
Protein NIMIN-1
Gene namesi
Name:NIMIN-1
Ordered Locus Names:At1g02450
ORF Names:T14P4.19, T6A9_28
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G02450.

Subcellular locationi

Nucleus 1 Publication

GO - Cellular componenti

  1. nucleus Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 142142Protein NIM1-INTERACTING 1
PRO_0000407996Add
BLAST

Proteomic databases

PRIDEiQ9FNZ5.

Expressioni

Inductioni

By salicylic acid (SA) and BTH.1 Publication

Gene expression databases

GenevestigatoriQ9FNZ5.

Interactioni

Subunit structurei

Interacts with NPR1.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
NPR1Q8L9W45EBI-541099,EBI-541093

Protein-protein interaction databases

BioGridi23040. 3 interactions.
IntActiQ9FNZ5. 6 interactions.
STRINGi3702.AT1G02450.1-P.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni47 – 537Involved in NPR1/NIM1 interaction

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili110 – 14132 Reviewed prediction
Add
BLAST

Motif

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Motifi60 – 645Nuclear localization signal Reviewed prediction

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi36 – 438Poly-Glu

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiNOG313903.
HOGENOMiHOG000152574.
InParanoidiQ9FNZ5.
OMAiTEERNED.

Sequencei

Sequence statusi: Complete.

Q9FNZ5-1 [UniParc]FASTAAdd to Basket

« Hide

MYPKQFSLYN YSLETMSKDE NVESKETIRV DKRVREDEEE EEEKKIDTFF    50
KLIKHYQEAR KRRREELAEN SGVVRRKSNG GERSGIVVPA FQPEDFSQCR 100
TGLKPPLMFV SDHKEENTKV EQEEDQTEER NEDKALDLNL AL 142
Length:142
Mass (Da):16,818
Last modified:March 1, 2001 - v1
Checksum:i5C8EB7C4A7064B65
GO

Sequence cautioni

The sequence AAG10641.1 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ250184 mRNA. Translation: CAC19844.1.
AC022521 Genomic DNA. Translation: AAG10641.1. Different initiation.
AC064879 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE27431.1.
AK119149 mRNA. Translation: BAC43719.1.
BT003662 mRNA. Translation: AAO39890.1.
PIRiA86155.
RefSeqiNP_563653.2. NM_100126.3.
UniGeneiAt.10196.

Genome annotation databases

EnsemblPlantsiAT1G02450.1; AT1G02450.1; AT1G02450.
GeneIDi837800.
KEGGiath:AT1G02450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AJ250184 mRNA. Translation: CAC19844.1 .
AC022521 Genomic DNA. Translation: AAG10641.1 . Different initiation.
AC064879 Genomic DNA. No translation available.
CP002684 Genomic DNA. Translation: AEE27431.1 .
AK119149 mRNA. Translation: BAC43719.1 .
BT003662 mRNA. Translation: AAO39890.1 .
PIRi A86155.
RefSeqi NP_563653.2. NM_100126.3.
UniGenei At.10196.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 23040. 3 interactions.
IntActi Q9FNZ5. 6 interactions.
STRINGi 3702.AT1G02450.1-P.

Proteomic databases

PRIDEi Q9FNZ5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G02450.1 ; AT1G02450.1 ; AT1G02450 .
GeneIDi 837800.
KEGGi ath:AT1G02450.

Organism-specific databases

TAIRi AT1G02450.

Phylogenomic databases

eggNOGi NOG313903.
HOGENOMi HOG000152574.
InParanoidi Q9FNZ5.
OMAi TEERNED.

Gene expression databases

Genevestigatori Q9FNZ5.

Family and domain databases

ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "NIMIN-1, NIMIN-2 and NIMIN-3, members of a novel family of proteins from Arabidopsis that interact with NPR1/NIM1, a key regulator of systemic acquired resistance in plants."
    Weigel R.R., Baeuscher C., Pfitzner A.J.P., Pfitzner U.M.
    Plant Mol. Biol. 46:143-160(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], INTERACTION WITH NPR1, INDUCTION, SUBCELLULAR LOCATION.
    Strain: cv. Columbia.
  2. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  5. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiNIMI1_ARATH
AccessioniPrimary (citable) accession number: Q9FNZ5
Secondary accession number(s): Q9FWX4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 3, 2011
Last sequence update: March 1, 2001
Last modified: June 11, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names

External Data

Dasty 3

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