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Protein

Protein NIM1-INTERACTING 1

Gene

NIMIN-1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • defense response to bacterium Source: TAIR
  • negative regulation of transcription, DNA-templated Source: TAIR
  • regulation of systemic acquired resistance Source: TAIR

Names & Taxonomyi

Protein namesi
Recommended name:
Protein NIM1-INTERACTING 1
Short name:
Protein NIMIN-1
Gene namesi
Name:NIMIN-1
Ordered Locus Names:At1g02450
ORF Names:T14P4.19, T6A9_28
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G02450
TAIRilocus:2196065 AT1G02450

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004079961 – 142Protein NIM1-INTERACTING 1Add BLAST142

Proteomic databases

PaxDbiQ9FNZ5
PRIDEiQ9FNZ5

Expressioni

Inductioni

By salicylic acid (SA) and BTH.1 Publication

Gene expression databases

ExpressionAtlasiQ9FNZ5 baseline and differential
GenevisibleiQ9FNZ5 AT

Interactioni

Subunit structurei

Interacts with NPR1.1 Publication

Binary interactionsi

WithEntry#Exp.IntActNotes
NPR1Q8L9W45EBI-541099,EBI-541093

Protein-protein interaction databases

BioGridi23040, 3 interactors
IntActiQ9FNZ5, 6 interactors
STRINGi3702.AT1G02450.1

Structurei

3D structure databases

SMRiQ9FNZ5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni47 – 53Involved in NPR1/NIM1 interaction7

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili110 – 141Sequence analysisAdd BLAST32

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi60 – 64Nuclear localization signalSequence analysis5

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi36 – 43Poly-Glu8

Sequence similaritiesi

Belongs to the NPR1-interactor family.

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiENOG410JUCQ Eukaryota
ENOG4110700 LUCA
HOGENOMiHOG000152574
InParanoidiQ9FNZ5
OMAiTEERNED
OrthoDBiEOG0936108Z

Family and domain databases

InterProiView protein in InterPro
IPR034578 NIMIN-1
IPR031425 NPR1/NH1-interacting
PANTHERiPTHR33669 PTHR33669, 1 hit
PTHR33669:SF9 PTHR33669:SF9, 1 hit
PfamiView protein in Pfam
PF15699 NPR1_interact, 1 hit

Sequencei

Sequence statusi: Complete.

Q9FNZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYPKQFSLYN YSLETMSKDE NVESKETIRV DKRVREDEEE EEEKKIDTFF
60 70 80 90 100
KLIKHYQEAR KRRREELAEN SGVVRRKSNG GERSGIVVPA FQPEDFSQCR
110 120 130 140
TGLKPPLMFV SDHKEENTKV EQEEDQTEER NEDKALDLNL AL
Length:142
Mass (Da):16,818
Last modified:March 1, 2001 - v1
Checksum:i5C8EB7C4A7064B65
GO

Sequence cautioni

The sequence AAG10641 differs from that shown. Reason: Erroneous initiation. Translation N-terminally extended.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ250184 mRNA Translation: CAC19844.1
AC022521 Genomic DNA Translation: AAG10641.1 Different initiation.
AC064879 Genomic DNA No translation available.
CP002684 Genomic DNA Translation: AEE27431.1
AK119149 mRNA Translation: BAC43719.1
BT003662 mRNA Translation: AAO39890.1
PIRiA86155
RefSeqiNP_563653.2, NM_100126.4
UniGeneiAt.10196

Genome annotation databases

EnsemblPlantsiAT1G02450.1; AT1G02450.1; AT1G02450
GeneIDi837800
GrameneiAT1G02450.1; AT1G02450.1; AT1G02450
KEGGiath:AT1G02450

Similar proteinsi

Entry informationi

Entry nameiNIMI1_ARATH
AccessioniPrimary (citable) accession number: Q9FNZ5
Secondary accession number(s): Q9FWX4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 3, 2011
Last sequence update: March 1, 2001
Last modified: April 25, 2018
This is version 92 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health