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Protein

ABC transporter B family member 25

Gene

OsABCB25

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

May be involved in redistribution of internalized aluminum. May mediate vacuolar sequestration of a metal complex (By similarity).By similarity

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi415 – 422ATPPROSITE-ProRule annotation8

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter B family member 25
Short name:
ABC transporter ABCB.25
Short name:
OsABCB25
Alternative name(s):
Protein ALS1 homolog
Gene namesi
Name:OsABCB25
Ordered Locus Names:Os03g0755100, LOC_Os03g54790
ORF Names:OSJNBb0081K01.19
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 3

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 72HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei100 – 120HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei191 – 211HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei284 – 304HelicalPROSITE-ProRule annotationAdd BLAST21
Transmembranei320 – 340HelicalPROSITE-ProRule annotationAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane, Vacuole

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004055751 – 641ABC transporter B family member 25Add BLAST641

Proteomic databases

PaxDbiQ9FNU2.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FNU2. baseline and differential.
GenevisibleiQ9FNU2. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os03g54790.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FNU2.
SMRiQ9FNU2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 346ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST292
Domaini380 – 617ABC transporterPROSITE-ProRule annotationAdd BLAST238

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0058. Eukaryota.
COG1132. LUCA.
InParanoidiQ9FNU2.
OMAiSPLMEFL.
OrthoDBiEOG09360534.

Family and domain databases

InterProiView protein in InterPro
IPR003593. AAA+_ATPase.
IPR011527. ABC1_TM_dom.
IPR003439. ABC_transporter-like.
IPR017871. ABC_transporter_CS.
IPR027417. P-loop_NTPase.
PfamiView protein in Pfam
PF00664. ABC_membrane. 1 hit.
PF00005. ABC_tran. 1 hit.
SMARTiView protein in SMART
SM00382. AAA. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
SSF90123. SSF90123. 1 hit.
PROSITEiView protein in PROSITE
PS50929. ABC_TM1F. 1 hit.
PS00211. ABC_TRANSPORTER_1. 1 hit.
PS50893. ABC_TRANSPORTER_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FNU2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKNLRIKTG NRAPLLAQGE TSRALSDLEE GSNVQPENVG FCRVIKLARH
60 70 80 90 100
DAGKLVIATM ALLVASLSNI LVPKYGGKII DIVSRDVRRP EDKAQALDDV
110 120 130 140 150
TGTILYIVII VVTGSVCTAL RAWLFNSASE RVVARLRKDL FSHLVNQEIA
160 170 180 190 200
FFDVTRTGEL LSRLSEDTQI IKNAATTNLS EALRNITTTS IGLGFMFATS
210 220 230 240 250
WKLTLLALVI VPVISIAVRK FGRFLRELSH QTQAAAAVAS SIAEESFGAI
260 270 280 290 300
RTVRSFAQES HEVLRYGEKV DETLKLGLKQ AKVVGMFSGG LNAASTLSVV
310 320 330 340 350
IVVIYGANLT INGYMTTGSL TSFILYSLTV GSSVSALSGL YTTVMKASGA
360 370 380 390 400
SRRVFQLLDR VSSMANSGDR CPTNENDGEV ELDDVWFAYP SRPSHMILKG
410 420 430 440 450
ITLKLTPGSK VALVGPSGGG KTTIANLIER FYDPLKGRIL LNGVPLPEIS
460 470 480 490 500
HQFLHRKVSI VSQEPVLFNC SIEENIAYGL EGKASSADVE NAAKMANAHN
510 520 530 540 550
FICSFPDQYK TVVGERGIRL SGGQKQRVAI ARALLMNPRV LLLDEATSAL
560 570 580 590 600
DAESEYLVQD AMDSLMKGRT VLVIAHRLST VKSADTVAVI SDGQIVESGT
610 620 630 640
HDELLSRDGI YTALVKRQLQ GPRFEGTSNA TAEIEPISNG Q
Length:641
Mass (Da):69,200
Last modified:March 1, 2001 - v1
Checksum:iF82D17EABADE0134
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY013245 Genomic DNA. Translation: AAG45492.1.
AC120509 Genomic DNA. Translation: AAR01687.1.
DP000009 Genomic DNA. Translation: ABF98942.1.
AP008209 Genomic DNA. Translation: BAF13225.1.
AP014959 Genomic DNA. Translation: BAS86444.1.
AK066049 mRNA. Translation: BAG89793.1.

Genome annotation databases

EnsemblPlantsiOS03T0755100-01; OS03T0755100-01; OS03G0755100.
GrameneiOS03T0755100-01; OS03T0755100-01; OS03G0755100.

Similar proteinsi

Entry informationi

Entry nameiAB25B_ORYSJ
AccessioniPrimary (citable) accession number: Q9FNU2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 8, 2011
Last sequence update: March 1, 2001
Last modified: August 30, 2017
This is version 117 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families