Q9FNQ2 (E13L2_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Glucan endo-1,3-beta-glucosidase-like protein 2

Gene names

Ordered Locus Names:	At5g61130
ORF Names:	MAF19.13

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	201 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Subcellular location

Cell membrane; Lipid-anchor › GPI-anchor Ref.4 Ref.5.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal
PTM	GPI-anchor Glycoprotein Lipoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Uncategorized	? Inferred from direct assay. Source: TAIR
Biological process	callose deposition in cell wall Inferred from mutant phenotype. Source: TAIR
Cellular component	anchored to plasma membrane Inferred from direct assay Ref.4. Source: TAIR plant-type cell wall Inferred from direct assay. Source: TAIR plasmodesma Inferred from direct assay. Source: TAIR
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 19	19	Potential
	Chain	20 – 172	153	Glucan endo-1,3-beta-glucosidase-like protein 2		PRO_0000254001
	Propeptide	173 – 201	29	Removed in mature form Potential		PRO_0000254002
Regions
	Compositional bias	89 – 170	82	Thr-rich
Amino acid modifications
	Lipidation	172	1	GPI-anchor amidated serine Potential
	Glycosylation	154	1	N-linked (GlcNAc...) Potential
	Glycosylation	179	1	N-linked (GlcNAc...) Potential

Sequences

	Sequence		Length	Mass (Da)
	Q9FNQ2 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: D7DD73D40B9F0930	FASTA	201	20,365
	10 20 30 40 50 60 MAALVLSLLL LSLAGHSSAS WCVCKTGLSD TVLQATLDYA CGNGADCNPT KPKQSCFNPD 70 80 90 100 110 120 NVRSHCNYAV NSFFQKKGQS PGSCNFDGTA TPTNSDPSYT GCAFPTSASG SSGSTTVTPG 130 140 150 160 170 180 TTNPKGSPTT TTLPGSGTNS PYSGNPTNGV FGGNSTGGTT GTGINPDYTT DSSAFALKNS 190 200 SKLFICLLLI ASSGFCSFLM L

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones." Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N., Tabata S. DNA Res. 4:291-300(1997) [PubMed: 9405937] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins." Elortza F., Nuehse T.S., Foster L.J., Stensballe A., Peck S.C., Jensen O.N. Mol. Cell. Proteomics 2:1261-1270(2003) [PubMed: 14517339] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[5]	"Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment." Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S., Brodbeck U., Peck S.C., Jensen O.N. J. Proteome Res. 5:935-943(2006) [PubMed: 16602701] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB006696 Genomic DNA. Translation: BAB10375.1. CP002688 Genomic DNA. Translation: AED97424.1. BT005195 mRNA. Translation: AAO50728.1. BT003876 mRNA. Translation: AAO41925.1.
IPI	IPI00528246.
RefSeq	NP_200921.2. NM_125506.4.
UniGene	At.29122.
3D structure databases
ProteinModelPortal	Q9FNQ2.
SMR	Q9FNQ2. Positions 15-108.
ModBase	Search...
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43.
Proteomic databases
PRIDE	Q9FNQ2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G61130.1; AT5G61130.1; AT5G61130.
GeneID	836234.
GenomeReviews	Gene locus AT5G61130 in contig BA000015_GR.
KEGG	ath:AT5G61130.
NMPDR	fig|3702.1.peg.28131.
Organism-specific databases
TAIR	At5g61130.
Phylogenomic databases
GeneTree	EPGT00050000003232.
HOGENOM	HBG603981.
InParanoid	Q9FNQ2.
OMA	LAASDFC.
PhylomeDB	Q9FNQ2.
ProtClustDB	CLSN2687251.
Gene expression databases
ArrayExpress	Q9FNQ2.
Genevestigator	Q9FNQ2.
GermOnline	AT5G61130. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR012946. X8. [Graphical view]
Pfam	PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E13L2_ARATH

Accession

Primary (citable) accession number: Q9FNQ2

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 17, 2006
Last sequence update:	March 1, 2001
Last modified:	December 14, 2011
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program