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Protein

F-box protein At5g46170

Gene

At5g46170

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

  • cytokinin-activated signaling pathway Source: GO_Central
  • heat acclimation Source: TAIR
  • hormone transport Source: GO_Central

Names & Taxonomyi

Protein namesi
Recommended name:
F-box protein At5g46170
Gene namesi
Ordered Locus Names:At5g46170
ORF Names:MCL19.23
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G46170.
TAIRilocus:2161383. AT5G46170.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002835511 – 395F-box protein At5g46170Add BLAST395

Proteomic databases

PaxDbiQ9FNK5.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FNK5. baseline and differential.

Interactioni

Protein-protein interaction databases

BioGridi19908. 1 interactor.
IntActiQ9FNK5. 1 interactor.

Structurei

3D structure databases

ProteinModelPortaliQ9FNK5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 72F-boxAdd BLAST49

Phylogenomic databases

eggNOGiENOG410IG8T. Eukaryota.
ENOG41119HQ. LUCA.
HOGENOMiHOG000238387.
InParanoidiQ9FNK5.
OMAiSDISWVS.
OrthoDBiEOG09360HF5.
PhylomeDBiQ9FNK5.

Family and domain databases

Gene3Di3.80.10.10. 1 hit.
InterProiView protein in InterPro
IPR001810. F-box_dom.
IPR032675. L_dom-like.
PfamiView protein in Pfam
PF12937. F-box-like. 1 hit.
SUPFAMiSSF81383. SSF81383. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FNK5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVIIPRSDP PSRIHPEPPQ TLEIDHFDHL PDSILLLVFN KIGDVKALGR
60 70 80 90 100
CCVVSRRFHS LVPQVDNVVV RVDCVISDDD SSSLSSIKSR SGSSAGSFSA
110 120 130 140 150
IFRLVVGGIV KPLQALGQFL GTKRSSSSCG GSGSSSSSLS ISGDDDGGEI
160 170 180 190 200
EQGGVTHHSP TQVLKNFDEI RYLRIELPSG ELGIDDGVLL KWRAEFGSTL
210 220 230 240 250
DNCVILGASS VIPPNPMRVS QACDTTTVVE APGSGSDDNG SIPESFYTNG
260 270 280 290 300
GLKLRVVWTI SSLIAASARH YLLQPIIAEH KTLDSLVLTD SDGQGVLCMN
310 320 330 340 350
RDQLEELRVK PLAASSASKR TLVPALNMRL WYAPTLELPD GTVLKGATLV
360 370 380 390
AIRPSESKKE VSDISWVSSA FEEPYETAAK MLVKRRTYCL EMNSF
Length:395
Mass (Da):42,495
Last modified:March 1, 2001 - v1
Checksum:iB75E5558C7B63E49
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB006698 Genomic DNA. Translation: BAB08262.1.
CP002688 Genomic DNA. Translation: AED95349.1.
AY070105 mRNA. Translation: AAL49842.1.
AY142657 mRNA. Translation: AAN13195.1.
RefSeqiNP_199429.1. NM_123986.4.
UniGeneiAt.7273.

Genome annotation databases

EnsemblPlantsiAT5G46170.1; AT5G46170.1; AT5G46170.
GeneIDi834659.
GrameneiAT5G46170.1; AT5G46170.1; AT5G46170.
KEGGiath:AT5G46170.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiFB285_ARATH
AccessioniPrimary (citable) accession number: Q9FNK5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 3, 2007
Last sequence update: March 1, 2001
Last modified: June 7, 2017
This is version 87 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names