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Q9FN55 (Q9FN55_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 50. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Uncharacterized protein EMBL AED94681.1
Gene names
Ordered Locus Names:At5g41460 TAIR At5g41460
ORF Names:AT5G41460 EMBL AED94681.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL BAB08517.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length524 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q9FN55 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 6E83A5F18CFC6C9B

FASTA52460,011
        10         20         30         40         50         60 
MKLNNQKDPA EKLMWERTLS GSGSPTRPVS KLMVTLLLLV SATYVVYTLK LISNSRACQV 

        70         80         90        100        110        120 
EPFSAVVRRL NDIVNSSQPL ILFHTNQTAV IKSYASPPPS PPPPPPPPQT GFQHVVFGIA 

       130        140        150        160        170        180 
ASARLWKQRK EYIKIWYKPN QMRSYVWLEK PVTEEDEEDE ISLPPVKISG DTSKFPYKNK 

       190        200        210        220        230        240 
QGHRSAIRIS RIVTETLKLG LKDVRWFVMG DDDTVFVAEN LIRVLRKYDH NQMYYIGSLS 

       250        260        270        280        290        300 
ESHLQNIYFS YGMAYGGGGF AISYPLAVAL SKMQDRCIKR YPALYGSDDR MQACMAELGV 

       310        320        330        340        350        360 
PLTKELGFHQ YDVYGNLFGL LAAHPVAPLV TLHHLDVVEP IFPNMTRVDA LKHLQVPAKL 

       370        380        390        400        410        420 
DSAGLMQQSI CYDKRRKWTV SVSWGFAVQI FRGIFSAREI EMPSRTFLNW YRRADYTAYA 

       430        440        450        460        470        480 
FNTRPVSRHP CQKPFVFYMT STRVHRVTNM TVSRYEIHRV AHPECRWKMA NPSDIKTVIV 

       490        500        510        520 
YKKPDPHLWD RSPRRNCCRV KSKKNNTLEI SVAVCKEGEV VEVV 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of the regions of 1,044,062 bp covered by thirteen physically assigned P1 clones."
Kotani H., Nakamura Y., Sato S., Kaneko T., Asamizu E., Miyajima N., Tabata S.
DNA Res. 4:291-300(1997) [PubMed: 9405937] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Ecker J.R.
Submitted (OCT-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis ORF clones."
Shinn P., Chen H., Cheuk R., Kim C.J., Ecker J.R.
Submitted (JAN-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BT015815 mRNA. Translation: AAU94378.1.
BT020528 mRNA. Translation: AAW50706.1.
CP002688 Genomic DNA. Translation: AED94681.1.
AB006707 Genomic DNA. Translation: BAB08517.1.
IPIIPI00523737.
RefSeqNP_198961.1. NM_123510.3.
UniGeneAt.6489.

3D structure databases

ProteinModelPortalQ9FN55.
ModBaseSearch...

Protein family/group databases

CAZyGT31. Glycosyltransferase Family 31.

Proteomic databases

PRIDEQ9FN55.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G41460.1; AT5G41460.1; AT5G41460.
GeneID834147.
GenomeReviewsGene locus AT5G41460 in contig BA000015_GR.
KEGGath:AT5G41460.
NMPDRfig|3702.1.peg.25855.

Organism-specific databases

TAIRAt5g41460.

Phylogenomic databases

eggNOGKOG2246.
GeneTreeEPGT00050000000455.
HOGENOMHBG593120.
InParanoidQ9FN55.
OMAAREIEMP.
PhylomeDBQ9FN55.
ProtClustDBCLSN2686370.

Gene expression databases

GenevestigatorQ9FN55.

Family and domain databases

InterProIPR006740. DUF604.
[Graphical view]
PfamPF04646. DUF604. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9FN55_ARATH
AccessionPrimary (citable) accession number: Q9FN55
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)