Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

WD40 repeat-containing protein HOS15

Gene

HOS15

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at transcript leveli

Functioni

Acts as repressor of cold stress-regulated gene expression. Interacts specifically with and promotes deacetylation of histone H4. Plays a role in gene regulation for plant acclimation and tolerance to cold stress.1 Publication

GO - Molecular functioni

GO - Biological processi

  • histone deacetylation Source: TAIR
  • regulation of transcription from RNA polymerase II promoter Source: GO_Central
  • response to cold Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-KW

Keywordsi

Molecular functionRepressor
Biological processStress response, Transcription, Transcription regulation

Names & Taxonomyi

Protein namesi
Recommended name:
WD40 repeat-containing protein HOS15Curated
Alternative name(s):
HIGH OSMOTIC STRESS GENE EXPRESSION 151 Publication
Gene namesi
Name:HOS151 Publication
Ordered Locus Names:At5g67320Imported
ORF Names:K8K14.4Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G67320.
TAIRilocus:2158232. AT5G67320.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Disruption phenotypei

No visible phenotype under normal growth conditions, but mutant seedlings are hypersensitive to freezing.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004387361 – 613WD40 repeat-containing protein HOS15Add BLAST613

Proteomic databases

PaxDbiQ9FN19.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FN19. baseline and differential.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G67320.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FN19.
SMRiQ9FN19.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 37LisHPROSITE-ProRule annotationAdd BLAST33
Repeati263 – 302WD 1Sequence analysisAdd BLAST40
Repeati322 – 362WD 2Sequence analysisAdd BLAST41
Repeati363 – 402WD 3Sequence analysisAdd BLAST40
Repeati405 – 443WD 4Sequence analysisAdd BLAST39
Repeati446 – 485WD 5Sequence analysisAdd BLAST40
Repeati488 – 536WD 6Sequence analysisAdd BLAST49
Repeati539 – 580WD 7Sequence analysisAdd BLAST42
Repeati582 – 613WD 8Sequence analysisAdd BLAST32

Keywords - Domaini

Repeat, WD repeat

Phylogenomic databases

eggNOGiKOG0273. Eukaryota.
ENOG410XRSY. LUCA.
HOGENOMiHOG000220902.
KOiK04508.
OMAiKWDPQGQ.
OrthoDBiEOG093607RY.
PhylomeDBiQ9FN19.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiView protein in InterPro
IPR020472. G-protein_beta_WD-40_rep.
IPR006594. LisH.
IPR015943. WD40/YVTN_repeat-like_dom_sf.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
IPR036322. WD40_repeat_dom_sf.
PfamiView protein in Pfam
PF08513. LisH. 1 hit.
PF00400. WD40. 7 hits.
PRINTSiPR00320. GPROTEINBRPT.
SMARTiView protein in SMART
SM00667. LisH. 1 hit.
SM00320. WD40. 8 hits.
SUPFAMiSSF50978. SSF50978. 1 hit.
PROSITEiView protein in PROSITE
PS50896. LISH. 1 hit.
PS00678. WD_REPEATS_1. 3 hits.
PS50082. WD_REPEATS_2. 6 hits.
PS50294. WD_REPEATS_REGION. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FN19-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSLTSVELN FLVFRYLQES GFTHAAFTLG YEAGINKSNI DGNMVPPGAL
60 70 80 90 100
IKFVQKGLQY MEMEANLSNS EVDIDEDFSF FQPLDLISKD VKELQDMLRE
110 120 130 140 150
KKRKERDMEK ERDRSKENDK GVEREHEGDR NRAKEKDRHE KQKERERERE
160 170 180 190 200
KLEREKERER EKIEREKERE REKMEREIFE REKDRLKLEK EREIERERER
210 220 230 240 250
EKIEREKSHE KQLGDADREM VIDQTDKEIA GDGSTGAEPM DIVMTPTSQT
260 270 280 290 300
SHIPNSDVRI LEGHTSEVCA CAWSPSASLL ASGSGDATAR IWSIPEGSFK
310 320 330 340 350
AVHTGRNINA LILKHAKGKS NEKSKDVTTL DWNGEGTLLA TGSCDGQARI
360 370 380 390 400
WTLNGELIST LSKHKGPIFS LKWNKKGDYL LTGSVDRTAV VWDVKAEEWK
410 420 430 440 450
QQFEFHSGPT LDVDWRNNVS FATSSTDSMI YLCKIGETRP AKTFTGHQGE
460 470 480 490 500
VNCVKWDPTG SLLASCSDDS TAKIWNIKQS TFVHDLREHT KEIYTIRWSP
510 520 530 540 550
TGPGTNNPNK QLTLASASFD STVKLWDAEL GKMLCSFNGH REPVYSLAFS
560 570 580 590 600
PNGEYIASGS LDKSIHIWSI KEGKIVKTYT GNGGIFEVCW NKEGNKIAAC
610
FADNSVCVLD FRM
Length:613
Mass (Da):69,772
Last modified:March 1, 2001 - v1
Checksum:i04F40772311C0E76
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007645 Genomic DNA. Translation: BAB09017.1.
CP002688 Genomic DNA. Translation: AED98328.1.
AY057698 mRNA. Translation: AAL15328.1.
AY143932 mRNA. Translation: AAN28871.1.
AK221483 mRNA. Translation: BAD94649.1.
RefSeqiNP_201533.1. NM_126132.4.
UniGeneiAt.6493.

Genome annotation databases

EnsemblPlantsiAT5G67320.1; AT5G67320.1; AT5G67320.
GeneIDi836867.
GrameneiAT5G67320.1; AT5G67320.1; AT5G67320.
KEGGiath:AT5G67320.

Similar proteinsi

Entry informationi

Entry nameiHOS15_ARATH
AccessioniPrimary (citable) accession number: Q9FN19
Secondary accession number(s): Q56Y40
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 18, 2017
Last sequence update: March 1, 2001
Last modified: November 22, 2017
This is version 142 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names