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Protein

Vesicle-associated membrane protein 714

Gene

VAMP714

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Involved in the targeting and/or fusion of transport vesicles to their target membrane.1 Publication

GO - Molecular functioni

GO - Biological processi

  • exocytosis Source: GO_Central
  • protein transport Source: UniProtKB-KW
  • response to salt stress Source: TAIR
  • vesicle fusion Source: GO_Central
Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Vesicle-associated membrane protein 7141 Publication
Short name:
AtVAMP7141 Publication
Gene namesi
Name:VAMP7141 Publication
Ordered Locus Names:At5g22360Imported
ORF Names:MWD9.16Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G22360.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini2 – 190189CytoplasmicSequence analysisAdd
BLAST
Transmembranei191 – 21121Helical; Anchor for type IV membrane proteinSequence analysisAdd
BLAST
Topological domaini212 – 22110VesicularSequence analysis

GO - Cellular componenti

  • Golgi apparatus Source: TAIR
  • Golgi membrane Source: UniProtKB-SubCell
  • integral component of membrane Source: UniProtKB-KW
  • SNARE complex Source: GO_Central
  • vacuole Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedCombined sources
Chaini2 – 221220Vesicle-associated membrane protein 714PRO_0000206753Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineCombined sources

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9FMR5.
PRIDEiQ9FMR5.

PTM databases

iPTMnetiQ9FMR5.

Expressioni

Tissue specificityi

Highly expressed in leaves, stems and roots. Detected in flowers.1 Publication

Gene expression databases

GenevisibleiQ9FMR5. AT.

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

BioGridi17572. 6 interactions.
IntActiQ9FMR5. 6 interactions.
STRINGi3702.AT5G22360.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FMR5.
SMRiQ9FMR5. Positions 1-185.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 112106LonginPROSITE-ProRule annotationAdd
BLAST
Domaini127 – 18761v-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the synaptobrevin family.Curated
Contains 1 longin domain.PROSITE-ProRule annotation
Contains 1 v-SNARE coiled-coil homology domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042711.
InParanoidiQ9FMR5.
KOiK08515.
OMAiNARDFRV.
PhylomeDBiQ9FMR5.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FMR5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAIVYAVVAR GTVVLAEFSA VTGNTGAVVR RILEKLSPEI SDERLCFSQD
60 70 80 90 100
RYIFHILRSD GLTFLCMAND TFGRRVPFSY LEEIHMRFMK NYGKVAHNAP
110 120 130 140 150
AYAMNDEFSR VLHQQMEFFS SNPSVDTLNR VRGEVSEIRS VMVENIEKIM
160 170 180 190 200
ERGDRIELLV DKTATMQDSS FHFRKQSKRL RRALWMKNAK LLVLLTCLIV
210 220
FLLYIIIASF CGGITLPSCR S
Length:221
Mass (Da):25,317
Last modified:March 1, 2001 - v1
Checksum:i48B59E2845FB1D03
GO

Sequence cautioni

The sequence AAL15329.1 differs from that shown.Intron retention.Curated
The sequence AAM51590.1 differs from that shown.Intron retention.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007651 Genomic DNA. Translation: BAB08335.1.
CP002688 Genomic DNA. Translation: AED93017.1.
AY057699 mRNA. Translation: AAL15329.1. Sequence problems.
AY116956 mRNA. Translation: AAM51590.1. Sequence problems.
RefSeqiNP_197628.1. NM_122141.4.
UniGeneiAt.7361.

Genome annotation databases

EnsemblPlantsiAT5G22360.1; AT5G22360.1; AT5G22360.
GeneIDi832297.
GrameneiAT5G22360.1; AT5G22360.1; AT5G22360.
KEGGiath:AT5G22360.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB007651 Genomic DNA. Translation: BAB08335.1.
CP002688 Genomic DNA. Translation: AED93017.1.
AY057699 mRNA. Translation: AAL15329.1. Sequence problems.
AY116956 mRNA. Translation: AAM51590.1. Sequence problems.
RefSeqiNP_197628.1. NM_122141.4.
UniGeneiAt.7361.

3D structure databases

ProteinModelPortaliQ9FMR5.
SMRiQ9FMR5. Positions 1-185.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi17572. 6 interactions.
IntActiQ9FMR5. 6 interactions.
STRINGi3702.AT5G22360.1.

PTM databases

iPTMnetiQ9FMR5.

Proteomic databases

PaxDbiQ9FMR5.
PRIDEiQ9FMR5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G22360.1; AT5G22360.1; AT5G22360.
GeneIDi832297.
GrameneiAT5G22360.1; AT5G22360.1; AT5G22360.
KEGGiath:AT5G22360.

Organism-specific databases

TAIRiAT5G22360.

Phylogenomic databases

eggNOGiKOG0859. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000042711.
InParanoidiQ9FMR5.
KOiK08515.
OMAiNARDFRV.
PhylomeDBiQ9FMR5.

Miscellaneous databases

PROiQ9FMR5.

Gene expression databases

GenevisibleiQ9FMR5. AT.

Family and domain databases

Gene3Di1.10.3840.10. 1 hit.
3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones."
    Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N., Tabata S.
    DNA Res. 4:401-414(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "The Arabidopsis genome. An abundance of soluble N-ethylmaleimide-sensitive factor adaptor protein receptors."
    Sanderfoot A.A., Assaad F.F., Raikhel N.V.
    Plant Physiol. 124:1558-1569(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  5. "Systematic analysis of SNARE molecules in Arabidopsis: dissection of the post-Golgi network in plant cells."
    Uemura T., Ueda T., Ohniwa R.L., Nakano A., Takeyasu K., Sato M.H.
    Cell Struct. Funct. 29:49-65(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: TISSUE SPECIFICITY, SUBCELLULAR LOCATION.
  6. "Comparative large-scale characterisation of plant vs. mammal proteins reveals similar and idiosyncratic N-alpha acetylation features."
    Bienvenut W.V., Sumpton D., Martinez A., Lilla S., Espagne C., Meinnel T., Giglione C.
    Mol. Cell. Proteomics 11:M111.015131-M111.015131(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS], IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].

Entry informationi

Entry nameiVA714_ARATH
AccessioniPrimary (citable) accession number: Q9FMR5
Secondary accession number(s): Q93Z99
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 17, 2003
Last sequence update: March 1, 2001
Last modified: June 8, 2016
This is version 109 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.