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Protein

Protein LATERAL ORGAN BOUNDARIES

Gene

LOB

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility.

GO - Biological processi

  • multicellular organism development Source: UniProtKB-KW
  • organ boundary specification between lateral organs and the meristem Source: TAIR

Keywordsi

Molecular functionDevelopmental protein

Names & Taxonomyi

Protein namesi
Recommended name:
Protein LATERAL ORGAN BOUNDARIES
Alternative name(s):
ASYMMETRIC LEAVES 2-like protein 4
Short name:
AS2-like protein 4
Gene namesi
Name:LOB
Synonyms:ASL4
Ordered Locus Names:At5g63090
ORF Names:MDC12.5
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G63090
TAIRilocus:2161982 AT5G63090

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001322501 – 186Protein LATERAL ORGAN BOUNDARIESAdd BLAST186

Proteomic databases

PaxDbiQ9FML4

Expressioni

Tissue specificityi

Expressed in a band of cells at the adaxial base of all lateral organs formed from the shoot apical meristem and at the base of lateral roots.1 Publication

Inductioni

Positively regulated within the shoot apex by both ASYMMETRIC LEAVES 1 (AS1) and ASYMMETRIC LEAVES 2 (AS2/LBD6) and by KNAT1.1 Publication

Gene expression databases

ExpressionAtlasiQ9FML4 baseline and differential

Interactioni

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi21672, 6 interactors
IntActiQ9FML4, 12 interactors
STRINGi3702.AT5G63090.1

Structurei

3D structure databases

SMRiQ9FML4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 111LOBPROSITE-ProRule annotationAdd BLAST102

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG410IWZU Eukaryota
ENOG4111S1U LUCA
HOGENOMiHOG000237548
InParanoidiQ9FML4
OMAiNSYNSPC
OrthoDBiEOG09360OQ2
PhylomeDBiQ9FML4

Family and domain databases

InterProiView protein in InterPro
IPR004883 LOB
PfamiView protein in Pfam
PF03195 LOB, 1 hit
PROSITEiView protein in PROSITE
PS50891 LOB, 1 hit

Sequencei

Sequence statusi: Complete.

Q9FML4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASSSNSYNS PCAACKFLRR KCMPGCIFAP YFPPEEPHKF ANVHKIFGAS
60 70 80 90 100
NVTKLLNELL PHQREDAVNS LAYEAEARVR DPVYGCVGAI SYLQRQVHRL
110 120 130 140 150
QKELDAANAD LAHYGLSTSA AGAPGNVVDL VFQPQPLPSQ QLPPLNPVYR
160 170 180
LSGASPVMNQ MPRGTGGSYG TFLPWNNGHD QQGGNM
Length:186
Mass (Da):20,227
Last modified:March 1, 2001 - v1
Checksum:i7CF92D7C07502D73
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF447897 mRNA Translation: AAL40346.1
AF447898 mRNA Translation: AAL40347.1
AF447899 mRNA Translation: AAL40348.1
AF447900 mRNA Translation: AAL40349.1
AB164305 mRNA Translation: BAD12424.1
AB473837 mRNA Translation: BAH10548.1
AB008265 Genomic DNA Translation: BAB10551.1
CP002688 Genomic DNA Translation: AED97700.1
CP002688 Genomic DNA Translation: AED97701.1
CP002688 Genomic DNA Translation: AED97702.1
CP002688 Genomic DNA Translation: AED97703.1
BT025745 mRNA Translation: ABF83635.1
RefSeqiNP_201114.1, NM_125703.4
NP_851252.1, NM_180921.2
NP_851253.1, NM_180922.1
NP_851254.1, NM_180923.1
UniGeneiAt.28568
At.74385

Genome annotation databases

EnsemblPlantsiAT5G63090.1; AT5G63090.1; AT5G63090
AT5G63090.2; AT5G63090.2; AT5G63090
AT5G63090.3; AT5G63090.3; AT5G63090
AT5G63090.4; AT5G63090.4; AT5G63090
GeneIDi836429
GrameneiAT5G63090.1; AT5G63090.1; AT5G63090
AT5G63090.2; AT5G63090.2; AT5G63090
AT5G63090.3; AT5G63090.3; AT5G63090
AT5G63090.4; AT5G63090.4; AT5G63090
KEGGiath:AT5G63090

Similar proteinsi

Entry informationi

Entry nameiLOB_ARATH
AccessioniPrimary (citable) accession number: Q9FML4
Secondary accession number(s): B7XG58, Q549W6, Q8VWF4
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 17, 2003
Last sequence update: March 1, 2001
Last modified: April 25, 2018
This is version 83 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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