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Q9FMK9 (PPA29_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable inactive purple acid phosphatase 29
Gene names
Name:PAP29
Ordered Locus Names:At5g63140
ORF Names:MDC12.10
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Binds 1 iron ion per subunit By similarity.

Binds 1 zinc ion per subunit By similarity.

Subunit structure

Homodimer By similarity.

Subcellular location

Secreted By similarity.

Tissue specificity

Expressed in roots, stems, leaves, flowers and siliques. Ref.1

Sequence similarities

Belongs to the metallophosphoesterase superfamily. Purple acid phosphatase family.

Caution

Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.

Ontologies

Keywords
   Cellular componentSecreted
   DomainSignal
   LigandIron
Metal-binding
Zinc
   PTMGlycoprotein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processdephosphorylation

Inferred from sequence or structural similarity Ref.1. Source: GOC

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionacid phosphatase activity

Inferred from sequence or structural similarity Ref.1. Source: TAIR

metal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3434 Potential
Chain35 – 389355Probable inactive purple acid phosphatase 29
PRO_0000372831

Regions

Region303 – 3053Substrate binding By similarity

Sites

Metal binding1361Zinc By similarity
Metal binding3031Zinc By similarity
Metal binding3051Iron By similarity
Binding site1361Substrate By similarity

Amino acid modifications

Glycosylation801N-linked (GlcNAc...) Potential
Glycosylation1911N-linked (GlcNAc...) Potential
Glycosylation2671N-linked (GlcNAc...) Potential
Glycosylation3801N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q9FMK9 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 0E483ABCB10AF18A

FASTA38943,548
        10         20         30         40         50         60 
MADNRRRRSL FDFLLFSVFL GLACLCLSPI PATAQRRKLR FSVNGEFKIL QVADMHFANG 

        70         80         90        100        110        120 
AKTQCQNVLP SQRAHCSDLN TTIFMSRVIA AEKPDLIVFT GDNIFGFDVK DALKSINAAF 

       130        140        150        160        170        180 
APAIASKIPW VAILGNHDQE STFTRQQVMN HIVKLPNTLS QVNPPEAAHY IDGFGNYNLQ 

       190        200        210        220        230        240 
IHGAADSKLQ NKSVLNLYFL DSGDYSSVPY MEGYDWIKTS QQFWFDRTSK RLKREYNAKP 

       250        260        270        280        290        300 
NPQEGIAPGL AYFHIPLPEF LSFDSKNATK GVRQEGTSAA STNSGFFTTL IARGDVKSVF 

       310        320        330        340        350        360 
VGHDHVNDFC GELKGLNLCY GGGFGYHAYG KAGWERRARV VVVDLNKKRK GKWGAVKSIK 

       370        380 
TWKRLDDKHL SVIDSQVLWN NSANKLVVR 

« Hide

References

« Hide 'large scale' references
[1]"Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower."
Zhu H., Qian W., Lu X., Li D., Liu X., Liu K., Wang D.
Plant Mol. Biol. 59:581-594(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
Strain: cv. Columbia.
[2]"Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones."
Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N., Tabata S.
DNA Res. 4:401-414(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[4]"Arabidopsis ORF clones."
Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[5]"Purple acid phosphatases of Arabidopsis thaliana. Comparative analysis and differential regulation by phosphate deprivation."
Li D., Zhu H., Liu K., Liu X., Leggewie G., Udvardi M., Wang D.
J. Biol. Chem. 277:27772-27781(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AY882861 mRNA. Translation: AAW80661.1.
AB008265 Genomic DNA. Translation: BAB10556.1.
CP002688 Genomic DNA. Translation: AED97710.1.
BT014894 mRNA. Translation: AAT44970.1.
BT015022 mRNA. Translation: AAT70473.1.
RefSeqNP_201119.1. NM_125709.4.
UniGeneAt.8836.

3D structure databases

ProteinModelPortalQ9FMK9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT5G63140.1-P.

Proteomic databases

PaxDbQ9FMK9.
PRIDEQ9FMK9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G63140.1; AT5G63140.1; AT5G63140.
GeneID836435.
KEGGath:AT5G63140.

Organism-specific databases

TAIRAT5G63140.

Phylogenomic databases

eggNOGCOG1409.
HOGENOMHOG000249829.
InParanoidQ9FMK9.
OMAWNRGSNG.
PhylomeDBQ9FMK9.

Gene expression databases

GenevestigatorQ9FMK9.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR004843. Calcineurin-like_PHP_apaH.
IPR029052. Metallo-depent_PP-like.
IPR011230. Pesterase_At2g46.
[Graphical view]
PfamPF00149. Metallophos. 1 hit.
[Graphical view]
PIRSFPIRSF030250. Ptase_At2g46880. 1 hit.
SUPFAMSSF56300. SSF56300. 1 hit.
ProtoNetSearch...

Entry information

Entry namePPA29_ARATH
AccessionPrimary (citable) accession number: Q9FMK9
Entry history
Integrated into UniProtKB/Swiss-Prot: May 5, 2009
Last sequence update: March 1, 2001
Last modified: June 11, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names