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Q9FMK9

- PPA29_ARATH

UniProt

Q9FMK9 - PPA29_ARATH

Protein

Probable inactive purple acid phosphatase 29

Gene

PAP29

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 iron ion per subunit.By similarity
    Binds 1 zinc ion per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi136 – 1361ZincBy similarity
    Binding sitei136 – 1361SubstrateBy similarity
    Metal bindingi303 – 3031ZincBy similarity
    Metal bindingi305 – 3051IronBy similarity

    GO - Molecular functioni

    1. acid phosphatase activity Source: TAIR
    2. metal ion binding Source: UniProtKB-KW

    GO - Biological processi

    1. dephosphorylation Source: GOC

    Keywords - Ligandi

    Iron, Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable inactive purple acid phosphatase 29
    Gene namesi
    Name:PAP29
    Ordered Locus Names:At5g63140
    ORF Names:MDC12.10
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 5

    Organism-specific databases

    TAIRiAT5G63140.

    Subcellular locationi

    Secreted By similarity

    GO - Cellular componenti

    1. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 3434Sequence AnalysisAdd
    BLAST
    Chaini35 – 389355Probable inactive purple acid phosphatase 29PRO_0000372831Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi80 – 801N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi191 – 1911N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi267 – 2671N-linked (GlcNAc...)Sequence Analysis
    Glycosylationi380 – 3801N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PaxDbiQ9FMK9.
    PRIDEiQ9FMK9.

    Expressioni

    Tissue specificityi

    Expressed in roots, stems, leaves, flowers and siliques.1 Publication

    Gene expression databases

    GenevestigatoriQ9FMK9.

    Interactioni

    Subunit structurei

    Homodimer.By similarity

    Protein-protein interaction databases

    STRINGi3702.AT5G63140.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9FMK9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni303 – 3053Substrate bindingBy similarity

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG1409.
    HOGENOMiHOG000249829.
    InParanoidiQ9FMK9.
    OMAiWNRGSNG.
    PhylomeDBiQ9FMK9.

    Family and domain databases

    Gene3Di3.60.21.10. 1 hit.
    InterProiIPR004843. Calcineurin-like_PHP_apaH.
    IPR029052. Metallo-depent_PP-like.
    IPR011230. Pesterase_At2g46.
    [Graphical view]
    PfamiPF00149. Metallophos. 1 hit.
    [Graphical view]
    PIRSFiPIRSF030250. Ptase_At2g46880. 1 hit.
    SUPFAMiSSF56300. SSF56300. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9FMK9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADNRRRRSL FDFLLFSVFL GLACLCLSPI PATAQRRKLR FSVNGEFKIL    50
    QVADMHFANG AKTQCQNVLP SQRAHCSDLN TTIFMSRVIA AEKPDLIVFT 100
    GDNIFGFDVK DALKSINAAF APAIASKIPW VAILGNHDQE STFTRQQVMN 150
    HIVKLPNTLS QVNPPEAAHY IDGFGNYNLQ IHGAADSKLQ NKSVLNLYFL 200
    DSGDYSSVPY MEGYDWIKTS QQFWFDRTSK RLKREYNAKP NPQEGIAPGL 250
    AYFHIPLPEF LSFDSKNATK GVRQEGTSAA STNSGFFTTL IARGDVKSVF 300
    VGHDHVNDFC GELKGLNLCY GGGFGYHAYG KAGWERRARV VVVDLNKKRK 350
    GKWGAVKSIK TWKRLDDKHL SVIDSQVLWN NSANKLVVR 389
    Length:389
    Mass (Da):43,548
    Last modified:March 1, 2001 - v1
    Checksum:i0E483ABCB10AF18A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY882861 mRNA. Translation: AAW80661.1.
    AB008265 Genomic DNA. Translation: BAB10556.1.
    CP002688 Genomic DNA. Translation: AED97710.1.
    BT014894 mRNA. Translation: AAT44970.1.
    BT015022 mRNA. Translation: AAT70473.1.
    RefSeqiNP_201119.1. NM_125709.4.
    UniGeneiAt.8836.

    Genome annotation databases

    EnsemblPlantsiAT5G63140.1; AT5G63140.1; AT5G63140.
    GeneIDi836435.
    KEGGiath:AT5G63140.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AY882861 mRNA. Translation: AAW80661.1 .
    AB008265 Genomic DNA. Translation: BAB10556.1 .
    CP002688 Genomic DNA. Translation: AED97710.1 .
    BT014894 mRNA. Translation: AAT44970.1 .
    BT015022 mRNA. Translation: AAT70473.1 .
    RefSeqi NP_201119.1. NM_125709.4.
    UniGenei At.8836.

    3D structure databases

    ProteinModelPortali Q9FMK9.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT5G63140.1-P.

    Proteomic databases

    PaxDbi Q9FMK9.
    PRIDEi Q9FMK9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT5G63140.1 ; AT5G63140.1 ; AT5G63140 .
    GeneIDi 836435.
    KEGGi ath:AT5G63140.

    Organism-specific databases

    TAIRi AT5G63140.

    Phylogenomic databases

    eggNOGi COG1409.
    HOGENOMi HOG000249829.
    InParanoidi Q9FMK9.
    OMAi WNRGSNG.
    PhylomeDBi Q9FMK9.

    Gene expression databases

    Genevestigatori Q9FMK9.

    Family and domain databases

    Gene3Di 3.60.21.10. 1 hit.
    InterProi IPR004843. Calcineurin-like_PHP_apaH.
    IPR029052. Metallo-depent_PP-like.
    IPR011230. Pesterase_At2g46.
    [Graphical view ]
    Pfami PF00149. Metallophos. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF030250. Ptase_At2g46880. 1 hit.
    SUPFAMi SSF56300. SSF56300. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower."
      Zhu H., Qian W., Lu X., Li D., Liu X., Liu K., Wang D.
      Plant Mol. Biol. 59:581-594(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
      Strain: cv. Columbia.
    2. "Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones."
      Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N., Tabata S.
      DNA Res. 4:401-414(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    3. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    4. "Arabidopsis ORF clones."
      Shinn P., Chen H., Cheuk R.F., Kim C.J., Ecker J.R.
      Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    5. "Purple acid phosphatases of Arabidopsis thaliana. Comparative analysis and differential regulation by phosphate deprivation."
      Li D., Zhu H., Liu K., Liu X., Leggewie G., Udvardi M., Wang D.
      J. Biol. Chem. 277:27772-27781(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiPPA29_ARATH
    AccessioniPrimary (citable) accession number: Q9FMK9
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 5, 2009
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Caution

    Lacks the conserved His residue essential for phosphatase activity. Its enzyme activity is therefore unsure.Curated

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3