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Q9FM43 (Q9FM43_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 86. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein kinase ATN1 EMBL BAB08524.1
Submitted name:
Protein kinase family protein EMBL AED94561.1
Submitted name:
Protein kinase like protein EMBL BAF01021.1
Gene names
Ordered Locus Names:At5g40540 TAIR At5g40540 EMBL BAF01021.1
ORF Names:AT5G40540 EMBL AED94561.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL BAB08524.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9FM43 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 5401B2671DDF4837

FASTA35339,661
        10         20         30         40         50         60 
MGSVTGFYSN EVFELDPKWV VDPQHLFVGP KIGEGAHAKI YEGKYKNKTV AIKIVKRGES 

        70         80         90        100        110        120 
PEEIAKRESR FAREVSMLSR VQHKNLVKFI GACKEPIMVI VTELLLGGTL RKYLVSLRPG 

       130        140        150        160        170        180 
SLDIRVAVGY ALDIARAMEC LHSHGVIHRD LKPESLILTA DYKTVKLADF GLAREESLTE 

       190        200        210        220        230        240 
MMTAETGTYR WMAPELYSTV TLRHGEKKHY NHKVDAYSFA IVLWELIHNK LPFEGMSNLQ 

       250        260        270        280        290        300 
AAYAAAFKNV RPSADDLPKD LAMIVTSCWK EDPNDRPNFT EIIQMLLRCL STISSTELVP 

       310        320        330        340        350 
PAIKRVFSSE NTVLPPESPG TCSLMTVRDK DQIPTDANSA QNEVRGSFFF FCC

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones."
Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N., Tabata S.
DNA Res. 5:41-54(1998) [PubMed: 9628582] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs."
Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. expand/collapse author list , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K.
Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002688 Genomic DNA. Translation: AED94561.1.
AB009052 Genomic DNA. Translation: BAB08524.1.
AK229147 mRNA. Translation: BAF01021.1.
IPIIPI00546689.
RefSeqNP_198870.1. NM_123418.4.
UniGeneAt.22654.

3D structure databases

HSSPHSSP built from PDB template 1RJB based on UniProtKB P36888.
ProteinModelPortalQ9FM43.
SMRQ9FM43. Positions 20-293.
ModBaseSearch...

Protein-protein interaction databases

IntActQ9FM43. 2 interactions.

Proteomic databases

PRIDEQ9FM43.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G40540.1; AT5G40540.1; AT5G40540.
GeneID834052.
GenomeReviewsGene locus AT5G40540 in contig BA000015_GR.
KEGGath:AT5G40540.
NMPDRfig|3702.1.peg.25755.

Organism-specific databases

TAIRAt5g40540.

Phylogenomic databases

eggNOGKOG0192.
GeneTreeEPGT00070000028502.
HOGENOMHBG755340.
InParanoidQ9FM43.
OMAANSAQNE.
PhylomeDBQ9FM43.
ProtClustDBCLSN2685016.

Gene expression databases

GenevestigatorQ9FM43.

Family and domain databases

InterProIPR011009. Kinase-like_dom.
IPR000719. Prot_kinase_cat_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR001245. Ser-Thr/Tyr_kinase.
IPR015784. Ser/Thr_kinase_ATN1.
[Graphical view]
PANTHERPTHR23257:SF83. ATN1_like. 1 hit.
PfamPF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
PRINTSPR00109. TYRKINASE.
SUPFAMSSF56112. Kinase_like. 1 hit.
PROSITEPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9FM43_ARATH
AccessionPrimary (citable) accession number: Q9FM43
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info