Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Probable protein S-acyltransferase 6

Gene

PAT06

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Palmitoyl acyltransferase.By similarity1 Publication

Catalytic activityi

Palmitoyl-CoA + [protein]-L-cysteine = [protein]-S-palmitoyl-L-cysteine + CoA.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei177S-palmitoyl cysteine intermediateBy similarity1

GO - Molecular functioni

Keywordsi

Molecular functionAcyltransferase, Transferase

Enzyme and pathway databases

BRENDAi2.3.1.225. 399.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein S-acyltransferase 6 (EC:2.3.1.225)
Alternative name(s):
Probable palmitoyltransferase At5g41060
Zinc finger DHHC domain-containing protein At5g41060
Gene namesi
Name:PAT06
Ordered Locus Names:At5g41060
ORF Names:MEE6.13
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRilocus:2163001. AT5G41060.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei45 – 65HelicalSequence analysisAdd BLAST21
Transmembranei76 – 96HelicalSequence analysisAdd BLAST21
Transmembranei191 – 211HelicalSequence analysisAdd BLAST21
Transmembranei235 – 255HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: TAIR

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003636071 – 410Probable protein S-acyltransferase 6Add BLAST410

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei325PhosphoserineBy similarity1

Keywords - PTMi

Lipoprotein, Palmitate, Phosphoprotein

Proteomic databases

PaxDbiQ9FLM3.

PTM databases

iPTMnetiQ9FLM3.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FLM3. baseline and differential.
GenevisibleiQ9FLM3. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G41060.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FLM3.
SMRiQ9FLM3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini147 – 197DHHCPROSITE-ProRule annotationAdd BLAST51

Domaini

The DHHC domain is required for palmitoyltransferase activity.By similarity

Sequence similaritiesi

Belongs to the DHHC palmitoyltransferase family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1311. Eukaryota.
COG5273. LUCA.
HOGENOMiHOG000242943.
InParanoidiQ9FLM3.
OMAiMYVVTPP.
OrthoDBiEOG09360EBP.
PhylomeDBiQ9FLM3.

Family and domain databases

InterProiView protein in InterPro
IPR001594. Palmitoyltrfase_DHHC.
PfamiView protein in Pfam
PF01529. zf-DHHC. 1 hit.
PROSITEiView protein in PROSITE
PS50216. DHHC. 1 hit.

Sequencei

Sequence statusi: Complete.

This entry describes 1 isoform i produced by alternative splicing. AlignAdd to basket

Note: A number of isoforms are produced. According to EST sequences.
Isoform 1 (identifier: Q9FLM3-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MYVVTPPQRS GFGSDCDLRV YQTWKGSNIF CLQGRFIFGP DVRSLGLTIS
60 70 80 90 100
LIVAPVTIFC IFVASKLMDD FSDSWGVSII LVAVVFTIYD LILLMLTSGR
110 120 130 140 150
DPGIIPRNSH PPEPEVVDGN TGSGTSQTPR LPRVKEVEVN GKVFKVKYCD
160 170 180 190 200
TCMLYRPPRC SHCSICNNCV ERFDHHCPWV GQCIAQRNYR FFFMFVFSTT
210 220 230 240 250
LLCVYVFAFC CVYIKKIKES EDISILKAML KTPASIALIL YTFISTFFVG
260 270 280 290 300
GLTCFHLYLI STNQTTYENF RYSYDRHSNP HNKGVVDNFK EIFFSPIPPS
310 320 330 340 350
KNNFRAMVPR ENPMPSRSVV GGFMSPNMGK ANDDIEMGRK GVWAMAEHGD
360 370 380 390 400
GKDGNNNERF HVNDNELNEL SPDMGNIVNG DEQINRPNNH PRNANWEMSP
410
EVMALSARRA
Length:410
Mass (Da):46,369
Last modified:March 1, 2001 - v1
Checksum:iA693174A518FA168
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB010072 Genomic DNA. Translation: BAB09708.1.
CP002688 Genomic DNA. Translation: AED94631.1.
AY045978 mRNA. Translation: AAK76652.1.
AY079326 mRNA. Translation: AAL85057.1.
RefSeqiNP_198922.1. NM_123471.4. [Q9FLM3-1]
UniGeneiAt.6592.

Genome annotation databases

EnsemblPlantsiAT5G41060.1; AT5G41060.1; AT5G41060. [Q9FLM3-1]
GeneIDi834108.
GrameneiAT5G41060.1; AT5G41060.1; AT5G41060.
KEGGiath:AT5G41060.

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB010072 Genomic DNA. Translation: BAB09708.1.
CP002688 Genomic DNA. Translation: AED94631.1.
AY045978 mRNA. Translation: AAK76652.1.
AY079326 mRNA. Translation: AAL85057.1.
RefSeqiNP_198922.1. NM_123471.4. [Q9FLM3-1]
UniGeneiAt.6592.

3D structure databases

ProteinModelPortaliQ9FLM3.
SMRiQ9FLM3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G41060.1.

PTM databases

iPTMnetiQ9FLM3.

Proteomic databases

PaxDbiQ9FLM3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G41060.1; AT5G41060.1; AT5G41060. [Q9FLM3-1]
GeneIDi834108.
GrameneiAT5G41060.1; AT5G41060.1; AT5G41060.
KEGGiath:AT5G41060.

Organism-specific databases

AraportiAT5G41060.
TAIRilocus:2163001. AT5G41060.

Phylogenomic databases

eggNOGiKOG1311. Eukaryota.
COG5273. LUCA.
HOGENOMiHOG000242943.
InParanoidiQ9FLM3.
OMAiMYVVTPP.
OrthoDBiEOG09360EBP.
PhylomeDBiQ9FLM3.

Enzyme and pathway databases

BRENDAi2.3.1.225. 399.

Miscellaneous databases

PROiPR:Q9FLM3.

Gene expression databases

ExpressionAtlasiQ9FLM3. baseline and differential.
GenevisibleiQ9FLM3. AT.

Family and domain databases

InterProiView protein in InterPro
IPR001594. Palmitoyltrfase_DHHC.
PfamiView protein in Pfam
PF01529. zf-DHHC. 1 hit.
PROSITEiView protein in PROSITE
PS50216. DHHC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiZDH23_ARATH
AccessioniPrimary (citable) accession number: Q9FLM3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: March 1, 2001
Last modified: April 12, 2017
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.