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Protein

Pentatricopeptide repeat-containing protein At5g41170, mitochondrial

Gene

At5g41170

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Pentatricopeptide repeat-containing protein At5g41170, mitochondrial
Gene namesi
Ordered Locus Names:At5g41170
ORF Names:MEE6.24
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G41170
TAIRilocus:2163041 AT5G41170

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Mitochondrion

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 35MitochondrionSequence analysisAdd BLAST35
ChainiPRO_000036354936 – 527Pentatricopeptide repeat-containing protein At5g41170, mitochondrialAdd BLAST492

Proteomic databases

PaxDbiQ9FLL3

Expressioni

Gene expression databases

ExpressionAtlasiQ9FLL3 baseline and differential
GenevisibleiQ9FLL3 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G41170.1

Structurei

3D structure databases

ProteinModelPortaliQ9FLL3
SMRiQ9FLL3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati36 – 70PPR 1Add BLAST35
Repeati71 – 105PPR 2Add BLAST35
Repeati106 – 140PPR 3Add BLAST35
Repeati141 – 175PPR 4Add BLAST35
Repeati176 – 210PPR 5Add BLAST35
Repeati211 – 245PPR 6Add BLAST35
Repeati246 – 280PPR 7Add BLAST35
Repeati281 – 315PPR 8Add BLAST35
Repeati316 – 350PPR 9Add BLAST35
Repeati351 – 385PPR 10Add BLAST35
Repeati386 – 420PPR 11Add BLAST35
Repeati424 – 458PPR 12Add BLAST35
Repeati459 – 493PPR 13Add BLAST35
Repeati494 – 527PPR 14Add BLAST34

Sequence similaritiesi

Belongs to the PPR family. P subfamily.Curated

Keywords - Domaini

Repeat, Transit peptide

Phylogenomic databases

eggNOGiKOG4197 Eukaryota
ENOG410Z7Z7 LUCA
HOGENOMiHOG000015176
InParanoidiQ9FLL3
OMAiVPPNIRT
OrthoDBiEOG093606HI
PhylomeDBiQ9FLL3

Family and domain databases

Gene3Di1.25.40.10, 6 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF12854 PPR_1, 1 hit
PF13041 PPR_2, 5 hits
TIGRFAMsiTIGR00756 PPR, 12 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 14 hits

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FLL3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAMRFFQLHR NRLVKGNSGK ALSFSRLLDL SFWVRAFCNY REILRNGLHS
60 70 80 90 100
LQFNEALDLF THMVESRPLP SIIDFTKLLN VIAKMKKFDV VINLCDHLQI
110 120 130 140 150
MGVSHDLYTC NLLMNCFCQS SQPYLASSFL GKMMKLGFEP DIVTFTSLIN
160 170 180 190 200
GFCLGNRMEE AMSMVNQMVE MGIKPDVVMY TTIIDSLCKN GHVNYALSLF
210 220 230 240 250
DQMENYGIRP DVVMYTSLVN GLCNSGRWRD ADSLLRGMTK RKIKPDVITF
260 270 280 290 300
NALIDAFVKE GKFLDAEELY NEMIRMSIAP NIFTYTSLIN GFCMEGCVDE
310 320 330 340 350
ARQMFYLMET KGCFPDVVAY TSLINGFCKC KKVDDAMKIF YEMSQKGLTG
360 370 380 390 400
NTITYTTLIQ GFGQVGKPNV AQEVFSHMVS RGVPPNIRTY NVLLHCLCYN
410 420 430 440 450
GKVKKALMIF EDMQKREMDG VAPNIWTYNV LLHGLCYNGK LEKALMVFED
460 470 480 490 500
MRKREMDIGI ITYTIIIQGM CKAGKVKNAV NLFCSLPSKG VKPNVVTYTT
510 520
MISGLFREGL KHEAHVLFRK MKEDGVS
Length:527
Mass (Da):59,961
Last modified:March 1, 2001 - v1
Checksum:iDFFC3644051ED7C4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB010072 Genomic DNA Translation: BAB09719.1
CP002688 Genomic DNA Translation: AED94650.1
BT023465 mRNA Translation: AAY56456.1
RefSeqiNP_198933.1, NM_123482.3
UniGeneiAt.49775

Genome annotation databases

EnsemblPlantsiAT5G41170.1; AT5G41170.1; AT5G41170
GeneIDi834119
GrameneiAT5G41170.1; AT5G41170.1; AT5G41170
KEGGiath:AT5G41170

Similar proteinsi

Entry informationi

Entry nameiPP412_ARATH
AccessioniPrimary (citable) accession number: Q9FLL3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 10, 2009
Last sequence update: March 1, 2001
Last modified: April 25, 2018
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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