Unreviewed,
UniProtKB/TrEMBL Q9FLL0 (Q9FLL0_ARATH)
Last modified
April 14, 2009.
Version 44.
History...
Clusters with 100%,
90%,
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: At5g41200 EMBL ABN04754.1 Submitted name: Genomic DNA, chromosome 5, P1 clone:MEE6 EMBL BAB09722.1 | ||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||
| Taxonomic identifier | 3702 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 330 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Subcellular location | Nucleus By similarity. RuleBase RU000476V3 |
| Sequence similarities | Contains 1 MADS-box domain. RuleBase RU000476V3 Spearmint SPM002100 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation RuleBase RU000476V3 Spearmint SPM002100 |
| Cellular component | Nucleus RuleBase RU000476V3 Spearmint SPM002100 |
| Ligand | DNA-binding RuleBase RU000476V3 Spearmint SPM002100 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro |
| Cellular component | nucleus Inferred from electronic annotation. Source: InterPro |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA bindingInferred from electronic annotation. Source: InterPro transcription factor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Structural analysis of Arabidopsis thaliana chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nineteen physically assigned P1 and TAC clones." Sato S., Kaneko T., Kotani H., Nakamura Y., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:41-54(1998) [PubMed: 9628582] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Arabidopsis ORF clones." Bautista V.R., Kim C.J., Chen H., Wu S.Y., De Los Reyes C., Ecker J.R. Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| BT030016 mRNA. Translation: ABN04754.1. AB010072 Genomic DNA. Translation: BAB09722.1. | |
| IPI | IPI00533359. |
| RefSeq | NP_198936.1. |
| UniGene | At.55290 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9FLL0. 6 interactions. |
Genome annotation databases | |
| GeneID | 834122. |
| GenomeReviews | Gene locus AT5G41200 in contig BA000015_GR. |
| KEGG | ath:AT5G41200. |
| NMPDR | fig|3702.1.peg.25830. |
Organism-specific databases | |
| TAIR | At5g41200. |
Family and domain databases | |
| InterPro | IPR002100. TF_MADSbox. [Graphical view] |
| Pfam | PF00319. SRF-TF. 1 hit. [Graphical view] |
| SMART | SM00432. MADS. 1 hit. [Graphical view] |
| PROSITE | PS50066. MADS_BOX_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9FLL0_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9FLL0 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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