Q9FL19 (Q9FL19_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
MADS-box protein AGL76 EMBL AAN52786.1

Submitted name:
Protein agamous-like 76 EMBL AED94511.1

Gene names

Name:	AGL76 EMBL AED94511.1
Ordered Locus Names:	At5g40120 TAIR At5g40120
ORF Names:	AT5G40120 EMBL AED94511.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAB10893.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	385 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Subcellular location	Nucleus By similarity RuleBase RU000476.
Sequence similarities	Contains 1 MADS-box domain. SAAS SAAS002100 RuleBase RU000476

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS002100 RuleBase RU000476
Cellular component	Nucleus SAAS SAAS002100 RuleBase RU000476
Ligand	DNA-binding SAAS SAAS002100 RuleBase RU000476
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	nucleus Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW protein dimerization activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FL19 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 278A226347A90FD5	FASTA	385	44,447
	10 20 30 40 50 60 MTMRSLPFSS SSYSLASTSL SNRLETIFKK ASELCTLCDI EACVIYYGPD GELKTWPKEK 70 80 90 100 110 120 EKVRDIALRY SQLNEALRSK KSVNLHGFLN KKKKKKKKGL KNPNNKRKTC LKKNVNVLKY 130 140 150 160 170 180 PLADHYPPDQ VSQLTQSLKL HVSKFQERLR FLESQKQTKP DHQSLTPSSL NHQTQSLNPR 190 200 210 220 230 240 QFSLFMYNHG DNTLSQISVS ASNFNQNYFS ALLEQSELKN QLMKQDGYDQ NQNMRMGDIT 250 260 270 280 290 300 NNNFQLPYFS KKEAVQESVN YFGMNQLMLK ELYGCDQNMC MGNINSNSFQ HPCVSKAQHY 310 320 330 340 350 360 SAVEGSVNNQ RQSELMQQEL CGYEQNMCFT NNNFQVSNKE AVQESVTNFG LMQHELYGCD 370 380 QNMSMGNIIN NSFQQRLKHR TRICE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones." Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:131-145(1998) [PubMed: 9679202] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world." Parenicova L., de Folter S., Kieffer M., Horner D.S., Favalli C., Busscher J., Cook H.E., Ingram R.M., Kater M.M., Davies B., Angenent G.C., Colombo L. Plant Cell 15:1538-1551(2003) [PubMed: 12837945] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Siliques EMBL AAN52786.1.
[3]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[4]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[5]	Folter S. de, Busscher-Lange J., Angenent G. Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Siliques EMBL AAN52786.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY141222 mRNA. Translation: AAN52786.1. CP002688 Genomic DNA. Translation: AED94511.1. AB010699 Genomic DNA. Translation: BAB10893.1.
IPI	IPI00532692.
RefSeq	NP_198828.1. NM_123375.1.
UniGene	At.30302.
3D structure databases
ProteinModelPortal	Q9FL19.
SMR	Q9FL19. Positions 14-74.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9FL19. 9 interactions.
STRING	Q9FL19.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G40120.1; AT5G40120.1; AT5G40120.
GeneID	834009.
GenomeReviews	Gene locus AT5G40120 in contig BA000015_GR.
KEGG	ath:AT5G40120.
NMPDR	fig|3702.1.peg.25712.
Organism-specific databases
TAIR	At5g40120.
Phylogenomic databases
eggNOG	KOG0014.
GeneTree	EPGT00050000009835.
HOGENOM	HBG316768.
InParanoid	Q9FL19.
PhylomeDB	Q9FL19.
ProtClustDB	CLSN2686226.
Gene expression databases
Genevestigator	Q9FL19.
Family and domain databases
InterPro	IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF00319. SRF-TF. 1 hit. [Graphical view]
SMART	SM00432. MADS. 1 hit. [Graphical view]
SUPFAM	SSF55455. TF_MADSbox. 1 hit.
PROSITE	PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FL19_ARATH

Accession

Primary (citable) accession number: Q9FL19

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 73 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)