Unreviewed, UniProtKB/TrEMBL Q9FL19 (Q9FL19_ARATH)

Names and origin

Protein names

Submitted name:
    Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9 EMBL BAB10893.1
Submitted name:
    MADS-box protein AGL76 EMBL AAN52786.1

Gene names

Ordered Locus Names:

At5g40120 TAIR At5g40120

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	385 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subcellular location	Nucleus By similarity. RuleBase RU000476V3
Sequence similarities	Contains 1 MADS-box domain. RuleBase RU000476V3 Spearmint SPM002100

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000476V3 Spearmint SPM002100
Cellular component	Nucleus RuleBase RU000476V3 Spearmint SPM002100
Ligand	DNA-binding RuleBase RU000476V3 Spearmint SPM002100
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FL19-1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 278A226347A90FD5	FASTA	385	44,447
	10 20 30 40 50 60 MTMRSLPFSS SSYSLASTSL SNRLETIFKK ASELCTLCDI EACVIYYGPD GELKTWPKEK 70 80 90 100 110 120 EKVRDIALRY SQLNEALRSK KSVNLHGFLN KKKKKKKKGL KNPNNKRKTC LKKNVNVLKY 130 140 150 160 170 180 PLADHYPPDQ VSQLTQSLKL HVSKFQERLR FLESQKQTKP DHQSLTPSSL NHQTQSLNPR 190 200 210 220 230 240 QFSLFMYNHG DNTLSQISVS ASNFNQNYFS ALLEQSELKN QLMKQDGYDQ NQNMRMGDIT 250 260 270 280 290 300 NNNFQLPYFS KKEAVQESVN YFGMNQLMLK ELYGCDQNMC MGNINSNSFQ HPCVSKAQHY 310 320 330 340 350 360 SAVEGSVNNQ RQSELMQQEL CGYEQNMCFT NNNFQVSNKE AVQESVTNFG LMQHELYGCD 370 380 QNMSMGNIIN NSFQQRLKHR TRICE

References

[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones." Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S. DNA Res. 5:131-145(1998) [PubMed: 9679202] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world." Parenicova L., de Folter S., Kieffer M., Horner D.S., Favalli C., Busscher J., Cook H.E., Ingram R.M., Kater M.M., Davies B., Angenent G.C., Colombo L. Plant Cell 15:1538-1551(2003) [PubMed: 12837945] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Siliques EMBL AAN52786.1.
[3]	Folter S. de, Busscher-Lange J., Angenent G. Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Siliques EMBL AAN52786.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AY141222 mRNA. Translation: AAN52786.1. AB010699 Genomic DNA. Translation: BAB10893.1.
IPI	IPI00532692.
RefSeq	NP_198828.1.
UniGene	At.30302
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9FL19. 9 interactions.
Genome annotation databases
GeneID	834009.
GenomeReviews	Gene locus AT5G40120 in contig BA000015_GR.
KEGG	ath:AT5G40120.
NMPDR	fig|3702.1.peg.25712.
Organism-specific databases
TAIR	At5g40120.
Family and domain databases
InterPro	IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF00319. SRF-TF. 1 hit. [Graphical view]
SMART	SM00432. MADS. 1 hit. [Graphical view]
PROSITE	PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FL19_ARATH

Accession

Primary (citable) accession number: Q9FL19

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	April 14, 2009
This is version 45 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)