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Protein

Probable protein phosphatase 2C 79

Gene

At5g66080

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Mg2+By similarity, Mn2+By similarityNote: Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi87 – 871Manganese 1By similarity
Metal bindingi87 – 871Manganese 2By similarity
Metal bindingi88 – 881Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi288 – 2881Manganese 2By similarity
Metal bindingi347 – 3471Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: InterPro

GO - Biological processi

  1. protein dephosphorylation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Enzyme and pathway databases

BioCyciARA:AT5G66080-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 79 (EC:3.1.3.16)
Short name:
AtPP2C79
Gene namesi
Ordered Locus Names:At5g66080
ORF Names:K2A18.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G66080.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1818Sequence AnalysisAdd
BLAST
Chaini19 – 385367Probable protein phosphatase 2C 79PRO_0000367998Add
BLAST

Proteomic databases

PRIDEiQ9FKX4.

Expressioni

Gene expression databases

GenevestigatoriQ9FKX4.

Interactioni

Protein-protein interaction databases

BioGridi21982. 1 interaction.
IntActiQ9FKX4. 1 interaction.
MINTiMINT-8390450.

Structurei

3D structure databases

ProteinModelPortaliQ9FKX4.
SMRiQ9FKX4. Positions 80-356.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini47 – 356310PPM-type phosphatasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PPM-type phosphatase domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ9FKX4.
OMAiDSNAMSK.
PhylomeDBiQ9FKX4.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FKX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSLFFNFLT SCLWPSSSTT SHTYSDSKGK QDGLLWYKDS AHHLFGDFSM
60 70 80 90 100
AVVQANNLLE DQSQVESGPL TTLSSSGPYG TFVGVYDGHG GPETSRFVND
110 120 130 140 150
HLFHHLKRFA AEQDSMSVDV IRKAYEATEE GFLGVVAKQW AVKPHIAAVG
160 170 180 190 200
SCCLIGVVCD GKLYVANVGD SRAVLGKVIK ATGEVNALQL SAEHNVSIES
210 220 230 240 250
VRQEMHSLHP DDSHIVVLKH NVWRVKGIIQ VSRSIGDVYL KKSEFNKEPL
260 270 280 290 300
YTKYRLREPM KRPILSWEPS ITVHDLQPDD QFLIFASDGL WEQLSNQEAV
310 320 330 340 350
EIVQNHPRNG IARRLVKAAL QEAAKKREMR YSDLNKIERG VRRHFHDDIT
360 370 380
VVVLFLDTNL LSRASSLKTP SVSIRGGGIT LPKKL
Length:385
Mass (Da):42,963
Last modified:March 1, 2001 - v1
Checksum:iC28A2ABB7F243B2D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB011474 Genomic DNA. Translation: BAB10413.1.
CP002688 Genomic DNA. Translation: AED98157.1.
AY062587 mRNA. Translation: AAL32665.1.
BT001229 mRNA. Translation: AAN65116.1.
RefSeqiNP_201409.1. NM_126006.3.
UniGeneiAt.27294.

Genome annotation databases

EnsemblPlantsiAT5G66080.1; AT5G66080.1; AT5G66080.
GeneIDi836740.
KEGGiath:AT5G66080.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB011474 Genomic DNA. Translation: BAB10413.1.
CP002688 Genomic DNA. Translation: AED98157.1.
AY062587 mRNA. Translation: AAL32665.1.
BT001229 mRNA. Translation: AAN65116.1.
RefSeqiNP_201409.1. NM_126006.3.
UniGeneiAt.27294.

3D structure databases

ProteinModelPortaliQ9FKX4.
SMRiQ9FKX4. Positions 80-356.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi21982. 1 interaction.
IntActiQ9FKX4. 1 interaction.
MINTiMINT-8390450.

Proteomic databases

PRIDEiQ9FKX4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G66080.1; AT5G66080.1; AT5G66080.
GeneIDi836740.
KEGGiath:AT5G66080.

Organism-specific databases

TAIRiAT5G66080.

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000238703.
InParanoidiQ9FKX4.
OMAiDSNAMSK.
PhylomeDBiQ9FKX4.

Enzyme and pathway databases

BioCyciARA:AT5G66080-MONOMER.

Miscellaneous databases

PROiQ9FKX4.

Gene expression databases

GenevestigatoriQ9FKX4.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR000222. PP2C_Mn2_Asp60_BS.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
PROSITEiPS01032. PPM_1. 1 hit.
PS51746. PPM_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. V. Sequence features of the regions of 1,381,565 bp covered by twenty one physically assigned P1 and TAC clones."
    Kaneko T., Kotani H., Nakamura Y., Sato S., Asamizu E., Miyajima N., Tabata S.
    DNA Res. 5:131-145(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C79_ARATH
AccessioniPrimary (citable) accession number: Q9FKX4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 1, 2001
Last modified: April 29, 2015
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.