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Protein
Submitted name:

Protein agamous-like 77

Gene

AGL77

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • DNA binding Source: UniProtKB-KW
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotationSAAS annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein agamous-like 77Imported
Submitted name:
Putative uncharacterized protein At5g38740Imported
Gene namesi
Name:AGL77Imported
Ordered Locus Names:At5g38740Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G38740.

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G38740.1.

Structurei

3D structure databases

SMRiQ9FKR2. Positions 22-100.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 6943MADS-boxInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains 1 MADS-box domain.UniRule annotation

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000064579.
OrthoDBiEOG09360KG5.
PhylomeDBiQ9FKR2.

Family and domain databases

InterProiIPR002100. TF_MADSbox.
[Graphical view]
PfamiPF00319. SRF-TF. 1 hit.
[Graphical view]
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS50066. MADS_BOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9FKR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTIRSSPSS SRCSNSSSSS SYSLASTSLS NRLETIFKKA SELCTLCDIE
60 70 80 90 100
ACVIYYGPDG ELKTWPKERE KVRDIALRFN QLNEALRHKK SVNLHGFLNK
110 120 130 140 150
KKKNKGLKNP NKKKKTSLKN VNVLKYPLAD HYSPDQVSQL TQSLELNVSK
160 170 180 190 200
FQERLRFLES QKQNETKPDH QSLTSISSLN QSLNPSQFSL FMYNHGYNTL
210 220 230 240 250
SQIPVSASNF NQDYISALLE QSELKSQIMK QEVCGYEQNM CMSNHGDATL
260 270 280 290 300
SQIPFSASNF NQDFSANNNF QHSFVSNTQD YYSVQKSVNN NYGLKNQLMK
310 320 330 340 350
HDLCGYEHNM CMSNHGDATF SQIPLSASNF NQDFSVSIQE ESGLMQQELC
360 370 380 390 400
GYDQNQNMSM GDITNNNFQV TCASVLESVN NFGLNQLMHK EFYGCHQNMS
410 420
MGNINNNSFQ HPWVSNADHT RRYKNL
Length:426
Mass (Da):48,441
Last modified:March 1, 2001 - v1
Checksum:i9978E508FBE2A6C8
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei426 – 4261Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA. Translation: AED94355.1.
AB011478 Genomic DNA. Translation: BAB10132.1.
AB493770 mRNA. Translation: BAH30608.1.
RefSeqiNP_198690.1. NM_123235.1.
UniGeneiAt.65602.

Genome annotation databases

EnsemblPlantsiAT5G38740.1; AT5G38740.1; AT5G38740.
GeneIDi833865.
GrameneiAT5G38740.1; AT5G38740.1; AT5G38740.
KEGGiath:AT5G38740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA. Translation: AED94355.1.
AB011478 Genomic DNA. Translation: BAB10132.1.
AB493770 mRNA. Translation: BAH30608.1.
RefSeqiNP_198690.1. NM_123235.1.
UniGeneiAt.65602.

3D structure databases

SMRiQ9FKR2. Positions 22-100.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G38740.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G38740.1; AT5G38740.1; AT5G38740.
GeneIDi833865.
GrameneiAT5G38740.1; AT5G38740.1; AT5G38740.
KEGGiath:AT5G38740.

Organism-specific databases

TAIRiAT5G38740.

Phylogenomic databases

eggNOGiKOG0014. Eukaryota.
COG5068. LUCA.
HOGENOMiHOG000064579.
OrthoDBiEOG09360KG5.
PhylomeDBiQ9FKR2.

Family and domain databases

InterProiIPR002100. TF_MADSbox.
[Graphical view]
PfamiPF00319. SRF-TF. 1 hit.
[Graphical view]
SMARTiSM00432. MADS. 1 hit.
[Graphical view]
SUPFAMiSSF55455. SSF55455. 1 hit.
PROSITEiPS50066. MADS_BOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9FKR2_ARATH
AccessioniPrimary (citable) accession number: Q9FKR2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: September 7, 2016
This is version 110 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.