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Protein

Stress-response A/B barrel domain-containing protein At5g22580

Gene

At5g22580

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Involved in stress response.Curated

Cofactori

Mg2+By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi31Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi34Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi35Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi37Magnesium; via carbonyl oxygenBy similarity1

GO - Molecular functioni

Keywordsi

Biological processStress response
LigandMagnesium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Stress-response A/B barrel domain-containing protein At5g22580Curated
Alternative name(s):
Uncharacterized protein At5g22580
Gene namesi
Ordered Locus Names:At5g22580
ORF Names:MQJ16.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRilocus:2171102. AT5G22580.

Subcellular locationi

GO - Cellular componenti

  • chloroplast Source: TAIR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002206161 – 111Stress-response A/B barrel domain-containing protein At5g22580Add BLAST111

Proteomic databases

PaxDbiQ9FK81.
PRIDEiQ9FK81.

PTM databases

iPTMnetiQ9FK81.

Expressioni

Gene expression databases

ExpressionAtlasiQ9FK81. baseline and differential.
GenevisibleiQ9FK81. AT.

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi3702.AT5G22580.1.

Structurei

Secondary structure

1111
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 13Combined sources11
Helixi20 – 31Combined sources12
Helixi32 – 36Combined sources5
Beta strandi39 – 45Combined sources7
Turni50 – 52Combined sources3
Beta strandi58 – 66Combined sources9
Helixi67 – 74Combined sources8
Helixi77 – 88Combined sources12
Beta strandi91 – 100Combined sources10

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RJJNMR-A/B1-111[»]
ProteinModelPortaliQ9FK81.
SMRiQ9FK81.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9FK81.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 98Stress-response A/B barrelPROSITE-ProRule annotationAdd BLAST93

Phylogenomic databases

eggNOGiENOG410J1P5. Eukaryota.
ENOG410YNSU. LUCA.
HOGENOMiHOG000245859.
InParanoidiQ9FK81.
OMAiTHCFFLT.
OrthoDBiEOG09360UM4.
PhylomeDBiQ9FK81.

Family and domain databases

InterProiView protein in InterPro
IPR013097. Dabb.
IPR011008. Dimeric_a/b-barrel.
PfamiView protein in Pfam
PF07876. Dabb. 1 hit.
SMARTiView protein in SMART
SM00886. Dabb. 1 hit.
SUPFAMiSSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS51502. S_R_A_B_BARREL. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FK81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSGFKHLV VVKFKEDTKV DEILKGLENL VSQIDTVKSF EWGEDKESHD
60 70 80 90 100
MLRQGFTHAF SMTFENKDGY VAFTSHPLHV EFSAAFTAVI DKIVLLDFPV
110
AAVKSSVVAT P
Length:111
Mass (Da):12,349
Last modified:March 1, 2001 - v1
Checksum:i941968968A4BBA83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012244 Genomic DNA. Translation: BAB09130.1.
CP002688 Genomic DNA. Translation: AED93045.1.
AY050481 mRNA. Translation: AAK91494.1.
AF378886 mRNA. Translation: AAK55689.1.
RefSeqiNP_568422.1. NM_122164.5.
UniGeneiAt.47494.

Genome annotation databases

EnsemblPlantsiAT5G22580.1; AT5G22580.1; AT5G22580.
GeneIDi832321.
GrameneiAT5G22580.1; AT5G22580.1; AT5G22580.
KEGGiath:AT5G22580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012244 Genomic DNA. Translation: BAB09130.1.
CP002688 Genomic DNA. Translation: AED93045.1.
AY050481 mRNA. Translation: AAK91494.1.
AF378886 mRNA. Translation: AAK55689.1.
RefSeqiNP_568422.1. NM_122164.5.
UniGeneiAt.47494.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RJJNMR-A/B1-111[»]
ProteinModelPortaliQ9FK81.
SMRiQ9FK81.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G22580.1.

PTM databases

iPTMnetiQ9FK81.

Proteomic databases

PaxDbiQ9FK81.
PRIDEiQ9FK81.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G22580.1; AT5G22580.1; AT5G22580.
GeneIDi832321.
GrameneiAT5G22580.1; AT5G22580.1; AT5G22580.
KEGGiath:AT5G22580.

Organism-specific databases

AraportiAT5G22580.
TAIRilocus:2171102. AT5G22580.

Phylogenomic databases

eggNOGiENOG410J1P5. Eukaryota.
ENOG410YNSU. LUCA.
HOGENOMiHOG000245859.
InParanoidiQ9FK81.
OMAiTHCFFLT.
OrthoDBiEOG09360UM4.
PhylomeDBiQ9FK81.

Miscellaneous databases

EvolutionaryTraceiQ9FK81.
PROiPR:Q9FK81.

Gene expression databases

ExpressionAtlasiQ9FK81. baseline and differential.
GenevisibleiQ9FK81. AT.

Family and domain databases

InterProiView protein in InterPro
IPR013097. Dabb.
IPR011008. Dimeric_a/b-barrel.
PfamiView protein in Pfam
PF07876. Dabb. 1 hit.
SMARTiView protein in SMART
SM00886. Dabb. 1 hit.
SUPFAMiSSF54909. SSF54909. 1 hit.
PROSITEiView protein in PROSITE
PS51502. S_R_A_B_BARREL. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiY5258_ARATH
AccessioniPrimary (citable) accession number: Q9FK81
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: March 1, 2001
Last modified: April 12, 2017
This is version 91 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.