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Protein

Stress-response A/B barrel domain-containing protein At5g22580

Gene

At5g22580

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Involved in stress response.Curated

Cofactori

Mg2+By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi31Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi34Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi35Magnesium; via carbonyl oxygenBy similarity1
Metal bindingi37Magnesium; via carbonyl oxygenBy similarity1

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Stress response

Keywords - Ligandi

Magnesium, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Stress-response A/B barrel domain-containing protein At5g22580Curated
Alternative name(s):
Uncharacterized protein At5g22580
Gene namesi
Ordered Locus Names:At5g22580
ORF Names:MQJ16.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G22580.

Subcellular locationi

GO - Cellular componenti

  • chloroplast Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002206161 – 111Stress-response A/B barrel domain-containing protein At5g22580Add BLAST111

Proteomic databases

PaxDbiQ9FK81.
PRIDEiQ9FK81.

PTM databases

iPTMnetiQ9FK81.

Expressioni

Gene expression databases

GenevisibleiQ9FK81. AT.

Interactioni

Subunit structurei

Homodimer.1 Publication

Protein-protein interaction databases

STRINGi3702.AT5G22580.1.

Structurei

Secondary structure

1111
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 13Combined sources11
Helixi20 – 31Combined sources12
Helixi32 – 36Combined sources5
Beta strandi39 – 45Combined sources7
Turni50 – 52Combined sources3
Beta strandi58 – 66Combined sources9
Helixi67 – 74Combined sources8
Helixi77 – 88Combined sources12
Beta strandi91 – 100Combined sources10

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RJJNMR-A/B1-111[»]
ProteinModelPortaliQ9FK81.
SMRiQ9FK81.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ9FK81.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 98Stress-response A/B barrelPROSITE-ProRule annotationAdd BLAST93

Sequence similaritiesi

Contains 1 stress-response A/B barrel domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410J1P5. Eukaryota.
ENOG410YNSU. LUCA.
HOGENOMiHOG000245859.
InParanoidiQ9FK81.
OMAiTHCFFLT.
OrthoDBiEOG09360UM4.
PhylomeDBiQ9FK81.

Family and domain databases

InterProiIPR013097. Dabb.
IPR011008. Dimeric_a/b-barrel.
[Graphical view]
PfamiPF07876. Dabb. 1 hit.
[Graphical view]
SMARTiSM00886. Dabb. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.
PROSITEiPS51502. S_R_A_B_BARREL. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9FK81-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATSGFKHLV VVKFKEDTKV DEILKGLENL VSQIDTVKSF EWGEDKESHD
60 70 80 90 100
MLRQGFTHAF SMTFENKDGY VAFTSHPLHV EFSAAFTAVI DKIVLLDFPV
110
AAVKSSVVAT P
Length:111
Mass (Da):12,349
Last modified:March 1, 2001 - v1
Checksum:i941968968A4BBA83
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012244 Genomic DNA. Translation: BAB09130.1.
CP002688 Genomic DNA. Translation: AED93045.1.
AY050481 mRNA. Translation: AAK91494.1.
AF378886 mRNA. Translation: AAK55689.1.
RefSeqiNP_568422.1. NM_122164.5.
UniGeneiAt.47494.

Genome annotation databases

EnsemblPlantsiAT5G22580.1; AT5G22580.1; AT5G22580.
GeneIDi832321.
GrameneiAT5G22580.1; AT5G22580.1; AT5G22580.
KEGGiath:AT5G22580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012244 Genomic DNA. Translation: BAB09130.1.
CP002688 Genomic DNA. Translation: AED93045.1.
AY050481 mRNA. Translation: AAK91494.1.
AF378886 mRNA. Translation: AAK55689.1.
RefSeqiNP_568422.1. NM_122164.5.
UniGeneiAt.47494.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1RJJNMR-A/B1-111[»]
ProteinModelPortaliQ9FK81.
SMRiQ9FK81.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G22580.1.

PTM databases

iPTMnetiQ9FK81.

Proteomic databases

PaxDbiQ9FK81.
PRIDEiQ9FK81.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G22580.1; AT5G22580.1; AT5G22580.
GeneIDi832321.
GrameneiAT5G22580.1; AT5G22580.1; AT5G22580.
KEGGiath:AT5G22580.

Organism-specific databases

TAIRiAT5G22580.

Phylogenomic databases

eggNOGiENOG410J1P5. Eukaryota.
ENOG410YNSU. LUCA.
HOGENOMiHOG000245859.
InParanoidiQ9FK81.
OMAiTHCFFLT.
OrthoDBiEOG09360UM4.
PhylomeDBiQ9FK81.

Miscellaneous databases

EvolutionaryTraceiQ9FK81.
PROiQ9FK81.

Gene expression databases

GenevisibleiQ9FK81. AT.

Family and domain databases

InterProiIPR013097. Dabb.
IPR011008. Dimeric_a/b-barrel.
[Graphical view]
PfamiPF07876. Dabb. 1 hit.
[Graphical view]
SMARTiSM00886. Dabb. 1 hit.
[Graphical view]
SUPFAMiSSF54909. SSF54909. 1 hit.
PROSITEiPS51502. S_R_A_B_BARREL. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY5258_ARATH
AccessioniPrimary (citable) accession number: Q9FK81
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 30, 2005
Last sequence update: March 1, 2001
Last modified: November 30, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.