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Protein

F-box protein At5g18160

Gene

At5g18160

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
F-box protein At5g18160
Gene namesi
Ordered Locus Names:At5g18160
ORF Names:MRG7.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G18160.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002835271 – 379F-box protein At5g18160Add BLAST379

Proteomic databases

PaxDbiQ9FK54.

Expressioni

Gene expression databases

GenevisibleiQ9FK54. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G18160.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FK54.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini28 – 74F-boxAdd BLAST47

Sequence similaritiesi

Contains 1 F-box domain.Curated

Phylogenomic databases

HOGENOMiHOG000064703.
InParanoidiQ9FK54.
OMAiYEEFTHI.
OrthoDBiEOG09360BWI.
PhylomeDBiQ9FK54.

Family and domain databases

InterProiIPR013187. F-box-assoc_dom_typ3.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF08268. FBA_3. 1 hit.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
TIGRFAMsiTIGR01640. F_box_assoc_1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FK54-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDKQDEKKQG TTKSSSTLTT RCSHGNHISQ SNSIPLDITI EILSRLPAKS
60 70 80 90 100
IVRSRSVSKL WSSITTTPEF IKHRSKKTSP PCVLLIFRKH DKLIVFSSPQ
110 120 130 140 150
HQNTYSHVQD YHIEIPKNGF IRRLDSVHGL ICLEGSKQLV ICNPTLKRFF
160 170 180 190 200
PLPEPQGTGD EYNVGGFLGY EPIEGKYKAL CIVRGWNTQV LTLEIQESWR
210 220 230 240 250
VTKPGYTHWP TKDTGRCING VIYYKAIIFD RVPRHVIFGF DLRYEEFTHI
260 270 280 290 300
EFPMRNYDRF LMVSYEGRLA LISSTSSVVE IWSLEDAGNR KWSYEQFHLC
310 320 330 340 350
LPPNTSLKGV IDAGELIYTG FSLNRSFCVV YFDPKKNNIR ETKFQGIADN
360 370
QIWQPDRLGF DLVNDFYVLP NHIESFISF
Length:379
Mass (Da):43,697
Last modified:March 1, 2001 - v1
Checksum:iFDE5B5CBB3167CD1
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti121I → V in BT015507 (Ref. 3) Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012246 Genomic DNA. Translation: BAB09474.1.
CP002688 Genomic DNA. Translation: AED92514.1.
BT029543 mRNA. Translation: ABL66799.1.
BT015507 mRNA. No translation available.
RefSeqiNP_197317.1. NM_121821.1.
UniGeneiAt.51060.

Genome annotation databases

EnsemblPlantsiAT5G18160.1; AT5G18160.1; AT5G18160.
GeneIDi831934.
GrameneiAT5G18160.1; AT5G18160.1; AT5G18160.
KEGGiath:AT5G18160.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB012246 Genomic DNA. Translation: BAB09474.1.
CP002688 Genomic DNA. Translation: AED92514.1.
BT029543 mRNA. Translation: ABL66799.1.
BT015507 mRNA. No translation available.
RefSeqiNP_197317.1. NM_121821.1.
UniGeneiAt.51060.

3D structure databases

ProteinModelPortaliQ9FK54.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G18160.1.

Proteomic databases

PaxDbiQ9FK54.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G18160.1; AT5G18160.1; AT5G18160.
GeneIDi831934.
GrameneiAT5G18160.1; AT5G18160.1; AT5G18160.
KEGGiath:AT5G18160.

Organism-specific databases

TAIRiAT5G18160.

Phylogenomic databases

HOGENOMiHOG000064703.
InParanoidiQ9FK54.
OMAiYEEFTHI.
OrthoDBiEOG09360BWI.
PhylomeDBiQ9FK54.

Miscellaneous databases

PROiQ9FK54.

Gene expression databases

GenevisibleiQ9FK54. AT.

Family and domain databases

InterProiIPR013187. F-box-assoc_dom_typ3.
IPR017451. F-box-assoc_interact_dom.
IPR001810. F-box_dom.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF08268. FBA_3. 1 hit.
[Graphical view]
SMARTiSM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
TIGRFAMsiTIGR01640. F_box_assoc_1. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiFB260_ARATH
AccessioniPrimary (citable) accession number: Q9FK54
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: March 1, 2001
Last modified: November 2, 2016
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.