Q9FK49 (Q9FK49_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-1,3-glucanase-like protein EMBL BAB09480.1

Submitted name:
O-Glycosyl hydrolases family 17 protein EMBL AED92520.1

Gene names

Ordered Locus Names:	At5g18220 TAIR At5g18220
ORF Names:	AT5G18220 EMBL AED92520.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAB09480.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	488 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Ontologies

Keywords
Molecular function	Glycosidase RuleBase RU004336 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	anchored to membrane Traceable author statement. Source: TAIR
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FK49 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 0752D12B25F64295	FASTA	488	53,866
	10 20 30 40 50 60 MSNRRKQSTT AGIFLCITIV SLLSGDVSAL GVNWGTMSTH QLPPKTVVQM LKDNNVKKVK 70 80 90 100 110 120 LFDADTNTMV ALAGSGIEVM VAIPNDQLKA MGSYNRAKDW VRRNITRFND DVKIKYVAVG 130 140 150 160 170 180 NEPFLTAYNG SFINLTYPAL FNIQKALNEA GVGDFIKATV PLNADVYNSP LENPVPSAGS 190 200 210 220 230 240 FRQDIFEEMK LIVNFLAHNK APFTVNIYPF LSLYLSSDFP FDYAFFNGQN TVSDNGVIYT 250 260 270 280 290 300 NVFDANFDTL LASLKALGHG DMTVIVGEVG WPTDGDKNAN IPNAERFYTG LLPKLAANRG 310 320 330 340 350 360 TPMRPGYIEV YLFGFIDEDA KSIAPGNFER HWGIFKYDGQ PKFPADLSGA GQKKILTGAQ 370 380 390 400 410 420 NVQYLRNQWC MFNPNALTFS NNTNQLGDNV NYACTFSDCT ALGYGSSCGN LDEVGNASYA 430 440 450 460 470 480 FNMYFQVQNQ KAEACDFEGL AIITTRNISR EQCNFPIQIG DPTSGHSDHN HRFISFSLVS MLLLFTAL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones." Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S. DNA Res. 5:203-216(1998) [PubMed: 9734815] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002688 Genomic DNA. Translation: AED92520.1. AB012246 Genomic DNA. Translation: BAB09480.1.
IPI	IPI00546369.
RefSeq	NP_197323.1. NM_121827.1.
UniGene	At.49036.
3D structure databases
HSSP	HSSP built from PDB template 1AQ0 based on UniProtKB P12257.
ProteinModelPortal	Q9FK49.
SMR	Q9FK49. Positions 30-347, 358-458.
ModBase	Search...
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43. GH17. Glycoside Hydrolase Family 17.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G18220.1; AT5G18220.1; AT5G18220.
GeneID	831940.
GenomeReviews	Gene locus AT5G18220 in contig BA000015_GR.
KEGG	ath:AT5G18220.
NMPDR	fig|3702.1.peg.23994.
Organism-specific databases
TAIR	At5g18220.
Phylogenomic databases
GeneTree	EPGT00050000009360.
HOGENOM	HBG605194.
InParanoid	Q9FK49.
OMA	FQVQNQK.
PhylomeDB	Q9FK49.
ProtClustDB	CLSN2916317.
Gene expression databases
Genevestigator	Q9FK49.
Family and domain databases
InterPro	IPR000490. Glyco_hydro_17. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR012946. X8. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF00332. Glyco_hydro_17. 1 hit. PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00587. GLYCOSYL_HYDROL_F17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FK49_ARATH

Accession

Primary (citable) accession number: Q9FK49

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)