Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9FK28

- MEM12_ARATH

UniProt

Q9FK28 - MEM12_ARATH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Membrin-12

Gene

MEMB12

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.By similarity

GO - Biological processi

  1. protein transport Source: UniProtKB-KW
  2. regulation of innate immune response Source: TAIR
  3. regulation of protein secretion Source: TAIR
Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Enzyme and pathway databases

ReactomeiREACT_187630. XBP1(S) activates chaperone genes.

Names & Taxonomyi

Protein namesi
Recommended name:
Membrin-12
Short name:
AtMEMB12
Alternative name(s):
Golgi SNAP receptor complex member 2-2
Gene namesi
Name:MEMB12
Ordered Locus Names:At5g50440
ORF Names:MXI22.16
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 5

Organism-specific databases

TAIRiAT5G50440.

Subcellular locationi

GO - Cellular componenti

  1. cis-Golgi network Source: TAIR
  2. Golgi stack Source: InterPro
  3. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11RemovedBy similarity
Chaini2 – 219218Membrin-12PRO_0000212555Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9FK28.
PRIDEiQ9FK28.

Expressioni

Gene expression databases

GenevestigatoriQ9FK28.

Interactioni

Protein-protein interaction databases

BioGridi20358. 1 interaction.

Structurei

3D structure databases

ProteinModelPortaliQ9FK28.
SMRiQ9FK28. Positions 131-187.
ModBaseiSearch...
MobiDBiSearch...

Topological domain

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini2 – 197196CytoplasmicSequence AnalysisAdd
BLAST
Topological domaini216 – 2194VesicularSequence Analysis

Transmembrane

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei198 – 21518Helical; Anchor for type IV membrane proteinSequence AnalysisAdd
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the GOSR2 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG148687.
HOGENOMiHOG000264938.
InParanoidiQ9FK28.
KOiK08496.
OMAiEVYSSAK.
PhylomeDBiQ9FK28.

Family and domain databases

InterProiIPR027027. GOSR2/Membrin/Bos1.
[Graphical view]
PIRSFiPIRSF028865. Membrin-2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FK28-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MASGTVGGLS EVYSSAKRIL LRARNGIEKL ERFDSDPTDL ASSVKRDITE
60 70 80 90 100
VQSLCSNMDG LWRSIPVKSQ RDLWRRKSEQ VGEEAEYLNQ SLEKYMWRNQ
110 120 130 140 150
RKMLEAKERA DLLGRGSGEG AHILQIFDEE AQGMNSVKNS KRMLEDSFQS
160 170 180 190 200
GVAILSKYAE QRDRLKSAQR KALDVLNTVG LSNSVLRLIE RRNRVDTWIK
210
YAGMIATLVI LYLFIRWTR
Length:219
Mass (Da):25,105
Last modified:March 1, 2001 - v1
Checksum:i9885F002AF89B4EC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB012248 Genomic DNA. Translation: BAB09463.1.
CP002688 Genomic DNA. Translation: AED95946.1.
BT004999 mRNA. Translation: AAO50532.1.
RefSeqiNP_199855.1. NM_124426.4.
UniGeneiAt.29730.

Genome annotation databases

EnsemblPlantsiAT5G50440.1; AT5G50440.1; AT5G50440.
GeneIDi835112.
KEGGiath:AT5G50440.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB012248 Genomic DNA. Translation: BAB09463.1 .
CP002688 Genomic DNA. Translation: AED95946.1 .
BT004999 mRNA. Translation: AAO50532.1 .
RefSeqi NP_199855.1. NM_124426.4.
UniGenei At.29730.

3D structure databases

ProteinModelPortali Q9FK28.
SMRi Q9FK28. Positions 131-187.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 20358. 1 interaction.

Proteomic databases

PaxDbi Q9FK28.
PRIDEi Q9FK28.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT5G50440.1 ; AT5G50440.1 ; AT5G50440 .
GeneIDi 835112.
KEGGi ath:AT5G50440.

Organism-specific databases

GeneFarmi 4298. 433.
TAIRi AT5G50440.

Phylogenomic databases

eggNOGi NOG148687.
HOGENOMi HOG000264938.
InParanoidi Q9FK28.
KOi K08496.
OMAi EVYSSAK.
PhylomeDBi Q9FK28.

Enzyme and pathway databases

Reactomei REACT_187630. XBP1(S) activates chaperone genes.

Gene expression databases

Genevestigatori Q9FK28.

Family and domain databases

InterProi IPR027027. GOSR2/Membrin/Bos1.
[Graphical view ]
PIRSFi PIRSF028865. Membrin-2. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones."
    Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S.
    DNA Res. 5:203-216(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiMEM12_ARATH
AccessioniPrimary (citable) accession number: Q9FK28
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 17, 2003
Last sequence update: March 1, 2001
Last modified: October 29, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3