Q9FJZ3 (MAN7_ARATH) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 68.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Mannan endo-1,4-beta-mannosidase 7 EC=3.2.1.78 Alternative name(s): Beta-mannanase 7 Endo-beta-1,4-mannanase 7 Short name=AtMAN7 | ||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) | ||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis |
Protein attributes
| Sequence length | 431 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Catalytic activity | Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans. |
| Subcellular location | Secreted Potential. |
| Tissue specificity | Expressed in stems, flowers, siliques and seeds. Ref.4 |
| Sequence similarities | Belongs to the glycosyl hydrolase 5 (cellulase A) family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Secreted |
| Domain | Signal |
| Molecular function | Glycosidase Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro mannan endo-1,4-beta-mannosidase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones." Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S. DNA Res. 5:203-216(1998) [PubMed: 9734815] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia. |
| [3] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
| [4] | "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar." Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F. Funct. Integr. Genomics 7:1-16(2007) [PubMed: 16897088] [Abstract] Cited for: GENE FAMILY, TISSUE SPECIFICITY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB013389 Genomic DNA. Translation: BAB10922.1. CP002688 Genomic DNA. Translation: AED98217.1. BT000452 mRNA. Translation: AAN17429.1. BT008749 mRNA. Translation: AAP49511.1. |
| IPI | IPI00536325. |
| RefSeq | NP_201447.1. NM_126044.3. |
| UniGene | At.28865. At.67287. |
3D structure databases | |
| ProteinModelPortal | Q9FJZ3. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9FJZ3. 2 interactions. |
Protein family/group databases | |
| CAZy | GH5. Glycoside Hydrolase Family 5. |
Proteomic databases | |
| PRIDE | Q9FJZ3. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | AT5G66460.1; AT5G66460.1; AT5G66460. |
| GeneID | 836778. |
| GenomeReviews | Gene locus AT5G66460 in contig BA000015_GR. |
| KEGG | ath:AT5G66460. |
| NMPDR | fig|3702.1.peg.28750. |
Organism-specific databases | |
| TAIR | At5g66460. |
Phylogenomic databases | |
| eggNOG | euNOG11227. |
| GeneTree | EPGT00050000010376. |
| HOGENOM | HBG316339. |
| InParanoid | Q9FJZ3. |
| OMA | NRIPGID. |
| PhylomeDB | Q9FJZ3. |
| ProtClustDB | CLSN2916497. |
Gene expression databases | |
| ArrayExpress | Q9FJZ3. |
| Genevestigator | Q9FJZ3. |
Family and domain databases | |
| InterPro | IPR001547. Glyco_hydro_5. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF00150. Cellulase. 1 hit. [Graphical view] |
| SUPFAM | SSF51445. Glyco_hydro_cat. 1 hit. |
| PROSITE | PS00659. GLYCOSYL_HYDROL_F5. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | MAN7_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9FJZ3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Plant Protein Annotation Program | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| SIMILARITY comments Index of protein domains and families |

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