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Q9FJZ3

- MAN7_ARATH

UniProt

Q9FJZ3 - MAN7_ARATH

Protein

Mannan endo-1,4-beta-mannosidase 7

Gene

MAN7

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 90 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei203 – 2031Proton donorBy similarity
    Active sitei320 – 3201NucleophileBy similarity

    GO - Molecular functioni

    1. mannan endo-1,4-beta-mannosidase activity Source: TAIR

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. seed germination Source: TAIR

    Keywords - Molecular functioni

    Glycosidase, Hydrolase

    Enzyme and pathway databases

    BioCyciARA:AT5G66460-MONOMER.

    Protein family/group databases

    CAZyiGH5. Glycoside Hydrolase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Mannan endo-1,4-beta-mannosidase 7 (EC:3.2.1.78)
    Alternative name(s):
    Beta-mannanase 7
    Endo-beta-1,4-mannanase 7
    Short name:
    AtMAN7
    Gene namesi
    Name:MAN7
    Ordered Locus Names:At5g66460
    ORF Names:K1F13.12
    OrganismiArabidopsis thaliana (Mouse-ear cress)
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 5

    Organism-specific databases

    TAIRiAT5G66460.

    Subcellular locationi

    Secreted Curated

    GO - Cellular componenti

    1. cell periphery Source: TAIR
    2. extracellular region Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Secreted

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525Sequence AnalysisAdd
    BLAST
    Chaini26 – 431406Mannan endo-1,4-beta-mannosidase 7PRO_0000277480Add
    BLAST

    Proteomic databases

    PaxDbiQ9FJZ3.
    PRIDEiQ9FJZ3.

    Expressioni

    Tissue specificityi

    Expressed in stems, flowers, siliques and seeds.1 Publication

    Gene expression databases

    GenevestigatoriQ9FJZ3.

    Interactioni

    Protein-protein interaction databases

    BioGridi22020. 1 interaction.
    IntActiQ9FJZ3. 2 interactions.
    STRINGi3702.AT5G66460.1-P.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9FJZ3.
    SMRiQ9FJZ3. Positions 31-362.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Signal

    Phylogenomic databases

    eggNOGiCOG3934.
    HOGENOMiHOG000169952.
    InParanoidiQ9FJZ3.
    OMAiNRIPGID.
    PhylomeDBiQ9FJZ3.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR001547. Glyco_hydro_5.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF00150. Cellulase. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q9FJZ3-1 [UniParc]FASTAAdd to Basket

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    MKLLALFPFL AIVIQLSCWE LGTDALPSGG FVRTKGVQFS LNGYPYYANG    50
    FNAYWLMYVA SDPSQRSKIS TAFQDASRHG LTVARTWAFS DGGYRALQYS 100
    PGSYNEDMFQ GLDFALAEAR RHGIKIILSF ANNYESFGGR KQYVDWARSR 150
    GRPVSSEDDF FTDSLVKDFY KNHIKAVLNR FNTFTKVHYK DDPTIMAWEL 200
    MNEPRCPSDP SGRAIQAWIT EMAAHVKSLD RNHLLEAGLE GFYGQSSPQS 250
    KTLNPPGQFG TDFIANNRIP GIDFVTVHSY PDEWFPDSSE QSQMDFLNKW 300
    LDAHIQDAQN VLHKPIILAE FGKSMKKPGY TPAQRDIVFN TVYSKIYGSA 350
    KRGGAAAGGL FWQLLVNGID NFQDGYGIIL SQSSSTVNVI SQQSRKLTLI 400
    RKIFARMINV EKWKRARGQG QVGKRGHKIN N 431
    Length:431
    Mass (Da):48,573
    Last modified:March 1, 2001 - v1
    Checksum:iFA5BB16113E0F3DF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB013389 Genomic DNA. Translation: BAB10922.1.
    CP002688 Genomic DNA. Translation: AED98217.1.
    BT000452 mRNA. Translation: AAN17429.1.
    BT008749 mRNA. Translation: AAP49511.1.
    RefSeqiNP_201447.1. NM_126044.3.
    UniGeneiAt.28865.
    At.67287.

    Genome annotation databases

    EnsemblPlantsiAT5G66460.1; AT5G66460.1; AT5G66460.
    GeneIDi836778.
    KEGGiath:AT5G66460.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB013389 Genomic DNA. Translation: BAB10922.1 .
    CP002688 Genomic DNA. Translation: AED98217.1 .
    BT000452 mRNA. Translation: AAN17429.1 .
    BT008749 mRNA. Translation: AAP49511.1 .
    RefSeqi NP_201447.1. NM_126044.3.
    UniGenei At.28865.
    At.67287.

    3D structure databases

    ProteinModelPortali Q9FJZ3.
    SMRi Q9FJZ3. Positions 31-362.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 22020. 1 interaction.
    IntActi Q9FJZ3. 2 interactions.
    STRINGi 3702.AT5G66460.1-P.

    Protein family/group databases

    CAZyi GH5. Glycoside Hydrolase Family 5.

    Proteomic databases

    PaxDbi Q9FJZ3.
    PRIDEi Q9FJZ3.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT5G66460.1 ; AT5G66460.1 ; AT5G66460 .
    GeneIDi 836778.
    KEGGi ath:AT5G66460.

    Organism-specific databases

    TAIRi AT5G66460.

    Phylogenomic databases

    eggNOGi COG3934.
    HOGENOMi HOG000169952.
    InParanoidi Q9FJZ3.
    OMAi NRIPGID.
    PhylomeDBi Q9FJZ3.

    Enzyme and pathway databases

    BioCyci ARA:AT5G66460-MONOMER.

    Gene expression databases

    Genevestigatori Q9FJZ3.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR001547. Glyco_hydro_5.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF00150. Cellulase. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones."
      Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S.
      DNA Res. 5:203-216(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Columbia.
    2. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. Columbia.
    3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
      Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
      , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
      Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Columbia.
    4. "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar."
      Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F.
      Funct. Integr. Genomics 7:1-16(2007) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, TISSUE SPECIFICITY.

    Entry informationi

    Entry nameiMAN7_ARATH
    AccessioniPrimary (citable) accession number: Q9FJZ3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 6, 2007
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 90 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Arabidopsis thaliana
      Arabidopsis thaliana: entries and gene names
    2. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3