Reviewed,
UniProtKB/Swiss-Prot Q9FJZ3 (MAN7_ARATH)
Last modified
February 9, 2010.
Version 56.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Mannan endo-1,4-beta-mannosidase 7 EC=3.2.1.78 Alternative name(s): Beta-mannanase 7 Endo-beta-1,4-mannanase 7 Short name=AtMAN7 | ||||||
| Gene names |
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| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||||
| Taxonomic identifier | 3702 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 431 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | Random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans and glucomannans. |
| Subcellular location | Secreted Potential. |
| Tissue specificity | Expressed in stems, flowers, siliques and seeds. Ref.3 |
| Sequence similarities | Belongs to the glycosyl hydrolase 5 (cellulase A) family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Secreted |
| Domain | Signal |
| Molecular function | Glycosidase Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | cation binding Inferred from electronic annotation. Source: InterPro mannan endo-1,4-beta-mannosidase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Structural analysis of Arabidopsis thaliana chromosome 5. VI. Sequence features of the regions of 1,367,185 bp covered by 19 physically assigned P1 and TAC clones." Kotani H., Nakamura Y., Sato S., Asamizu E., Kaneko T., Miyajima N., Tabata S. DNA Res. 5:203-216(1998) [PubMed: 9734815] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
| [3] | "The endo-beta-mannanase gene families in Arabidopsis, rice, and poplar." Yuan J.S., Yang X., Lai J., Lin H., Cheng Z.-M., Nonogaki H., Chen F. Funct. Integr. Genomics 7:1-16(2007) [PubMed: 16897088] [Abstract] Cited for: GENE FAMILY, TISSUE SPECIFICITY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AB013389 Genomic DNA. Translation: BAB10922.1. BT000452 mRNA. Translation: AAN17429.1. BT008749 mRNA. Translation: AAP49511.1. |
| IPI | IPI00536325. |
| RefSeq | NP_201447.1. |
| UniGene | At.28865 At.67287 Rra.7711 Rsa.21731 Rsa.22257 |
3D structure databases | |
| SMR | Q9FJZ3. Positions 29-400. |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GH5. Glycoside Hydrolase Family 5. |
Proteomic databases | |
| PRIDE | Q9FJZ3. |
Genome annotation databases | |
| GeneID | 836778. |
| GenomeReviews | Gene locus AT5G66460 in contig BA000015_GR. |
| KEGG | ath:AT5G66460. |
| NMPDR | fig|3702.1.peg.28750. |
Organism-specific databases | |
| TAIR | At5g66460. |
Phylogenomic databases | |
| eggNOG | euNOG11227. |
| HOGENOM | HBG316339. |
| InParanoid | Q9FJZ3. |
| OMA | PYYANGF. |
Enzyme and pathway databases | |
| BRENDA | 3.2.1.78. 302. |
Gene expression databases | |
| ArrayExpress | Q9FJZ3. |
| Genevestigator | Q9FJZ3. |
Family and domain databases | |
| InterPro | IPR001547. Glyco_hydro_5. IPR017853. Glyco_hydro_catalytic_core. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view] |
| Gene3D | G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. |
| Pfam | PF00150. Cellulase. 1 hit. [Graphical view] |
| PROSITE | PS00659. GLYCOSYL_HYDROL_F5. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | MAN7_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9FJZ3 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| SIMILARITY comments Index of protein domains and families |

Clusters with


