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Protein

60S ribosomal protein L26-2

Gene

RPL26B

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • RNA binding Source: GO_Central
  • structural constituent of ribosome Source: CAFA

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-ATH-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-ATH-1799339 SRP-dependent cotranslational protein targeting to membrane
R-ATH-72689 Formation of a pool of free 40S subunits
R-ATH-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-ATH-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-ATH-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L26-2
Gene namesi
Name:RPL26B
Ordered Locus Names:At5g67510
ORF Names:K9I9.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G67510
TAIRilocus:2158616 AT5G67510

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001307981 – 14660S ribosomal protein L26-2Add BLAST146

Proteomic databases

PaxDbiQ9FJX2
PRIDEiQ9FJX2

Expressioni

Gene expression databases

ExpressionAtlasiQ9FJX2 baseline and differential
GenevisibleiQ9FJX2 AT

Interactioni

Protein-protein interaction databases

BioGridi22129, 1 interactor
IntActiQ9FJX2, 1 interactor
STRINGi3702.AT5G67510.1

Structurei

3D structure databases

ProteinModelPortaliQ9FJX2
SMRiQ9FJX2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG3401 Eukaryota
COG0198 LUCA
HOGENOMiHOG000216571
InParanoidiQ9FJX2
KOiK02898
OMAiTNEDVAP
OrthoDBiEOG09360SM0
PhylomeDBiQ9FJX2

Family and domain databases

Gene3Di2.30.30.30, 1 hit
InterProiView protein in InterPro
IPR005824 KOW
IPR014722 Rib_L2_dom2
IPR005825 Ribosomal_L24/26_CS
IPR005756 Ribosomal_L26/L24P_euk/arc
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR11143 PTHR11143, 1 hit
PfamiView protein in Pfam
PF00467 KOW, 1 hit
PF16906 Ribosomal_L26, 1 hit
SMARTiView protein in SMART
SM00739 KOW, 1 hit
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01080 rplX_A_E, 1 hit
PROSITEiView protein in PROSITE
PS01108 RIBOSOMAL_L24, 1 hit

Sequencei

Sequence statusi: Complete.

Q9FJX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKFNPRVSSS RRKNRKAHFT APSSVRRVLM SSPLSKDLRN KHNVRSMPIR
60 70 80 90 100
KDDEVQVVRG TFKGREGKVM QVYRRKWVIH IERITREKVN GSTVNVGVNA
110 120 130 140
SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
Length:146
Mass (Da):16,790
Last modified:March 1, 2001 - v1
Checksum:i15D6F29EC60876B2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB013390 Genomic DNA Translation: BAB08459.1
CP002688 Genomic DNA Translation: AED98354.1
AY065109 mRNA Translation: AAL38285.1
AY081628 mRNA Translation: AAM10190.1
AY086530 mRNA Translation: AAM63595.1
RefSeqiNP_201552.1, NM_126151.2
UniGeneiAt.28589

Genome annotation databases

EnsemblPlantsiAT5G67510.1; AT5G67510.1; AT5G67510
GeneIDi836887
GrameneiAT5G67510.1; AT5G67510.1; AT5G67510
KEGGiath:AT5G67510

Similar proteinsi

Entry informationi

Entry nameiRL262_ARATH
AccessioniPrimary (citable) accession number: Q9FJX2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 10, 2003
Last sequence update: March 1, 2001
Last modified: April 25, 2018
This is version 125 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health