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Protein

Glucan endo-1,3-beta-glucosidase 13

Gene

At5g56590

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei264NucleophileBy similarity1
Active sitei328NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCell wall biogenesis/degradation, Plant defense

Enzyme and pathway databases

BioCyciARA:AT5G56590-MONOMER

Protein family/group databases

CAZyiCBM43 Carbohydrate-Binding Module Family 43
GH17 Glycoside Hydrolase Family 17

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase 13 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase 13
Short name:
(1->3)-beta-glucanase 13
Beta-1,3-endoglucanase 13
Short name:
Beta-1,3-glucanase 13
Gene namesi
Ordered Locus Names:At5g56590
ORF Names:MIK19.3
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G56590
TAIRilocus:2164991 AT5G56590

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Cell wall, Membrane, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_000025127323 – 471Glucan endo-1,3-beta-glucosidase 13Add BLAST449
PropeptideiPRO_0000251274472 – 506Removed in mature formSequence analysisAdd BLAST35

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi70N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi127N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi175N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi212N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi356N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi361N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi370 ↔ 433By similarity
Glycosylationi459N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi465N-linked (GlcNAc...) asparagineSequence analysis1
Lipidationi471GPI-anchor amidated serineSequence analysis1

Post-translational modificationi

Contains two additional disulfide bonds.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ9FJU9
PRIDEiQ9FJU9

Expressioni

Gene expression databases

ExpressionAtlasiQ9FJU9 baseline and differential
GenevisibleiQ9FJU9 AT

Structurei

3D structure databases

ProteinModelPortaliQ9FJU9
SMRiQ9FJU9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IIXF Eukaryota
ENOG410YA1S LUCA
HOGENOMiHOG000238220
InParanoidiQ9FJU9
OMAiNPSYDNC
OrthoDBiEOG093608C4
PhylomeDBiQ9FJU9

Family and domain databases

InterProiView protein in InterPro
IPR000490 Glyco_hydro_17
IPR017853 Glycoside_hydrolase_SF
IPR012946 X8
PfamiView protein in Pfam
PF00332 Glyco_hydro_17, 1 hit
PF07983 X8, 1 hit
SMARTiView protein in SMART
SM00768 X8, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS00587 GLYCOSYL_HYDROL_F17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FJU9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH
60 70 80 90 100
NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
110 120 130 140 150
SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR
160 170 180 190 200
RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
210 220 230 240 250
YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL
260 270 280 290 300
TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
310 320 330 340 350
TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS
360 370 380 390 400
NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
410 420 430 440 450
PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK
460 470 480 490 500
CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT

MNSQAL
Length:506
Mass (Da):55,604
Last modified:March 1, 2001 - v1
Checksum:iDC314FEF619BE810
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB013392 Genomic DNA Translation: BAB09876.1
CP002688 Genomic DNA Translation: AED96784.1
AY133637 mRNA Translation: AAM91467.1
AY075591 mRNA Translation: AAL91612.1
RefSeqiNP_200470.1, NM_125042.4
UniGeneiAt.43021

Genome annotation databases

EnsemblPlantsiAT5G56590.1; AT5G56590.1; AT5G56590
GeneIDi835760
GrameneiAT5G56590.1; AT5G56590.1; AT5G56590
KEGGiath:AT5G56590

Similar proteinsi

Entry informationi

Entry nameiE1313_ARATH
AccessioniPrimary (citable) accession number: Q9FJU9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: March 1, 2001
Last modified: May 23, 2018
This is version 109 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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