Q9FJC3 (Q9FJC3_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate-binding X8 domain-containing protein EMBL AED96385.1

Gene names

Ordered Locus Names:	At5g53610 TAIR At5g53610
ORF Names:	AT5G53610 EMBL AED96385.1

Organism

Arabidopsis thaliana (Mouse-ear cress) EMBL BAB09737.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	110 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	Q9FJC3 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: D151290F548BBEB8	FASTA	110	12,130
	10 20 30 40 50 60 MSLQFLTLIF LLSAAVIYHI PVVTCEPWCS AMPSSTPEQL QANIQLACSR VDCTPIQPGG 70 80 90 100 110 FCYYPNTLLD HASFVMNSYY KSQGRTYAAC SFGNTGYLIY SDPSTGTCEF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence features of the regions of 1,013,767 bp covered by sixteen physically assigned P1 and TAC clones." Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N., Tabata S. DNA Res. 5:297-308(1998) [PubMed: 9872454] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana." Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F. Nature 408:823-826(2000) [PubMed: 11130714] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[3]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002688 Genomic DNA. Translation: AED96385.1. AB015476 Genomic DNA. Translation: BAB09737.1.
IPI	IPI00519464.
RefSeq	NP_200173.1. NM_124741.1.
UniGene	At.55527.
3D structure databases
ProteinModelPortal	Q9FJC3.
SMR	Q9FJC3. Positions 23-110.
ModBase	Search...
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G53610.1; AT5G53610.1; AT5G53610.
GeneID	835443.
GenomeReviews	Gene locus AT5G53610 in contig BA000015_GR.
KEGG	ath:AT5G53610.
NMPDR	fig|3702.1.peg.27257.
Organism-specific databases
TAIR	At5g53610.
Phylogenomic databases
GeneTree	EPGT00050000009358.
HOGENOM	HBG603981.
InParanoid	Q9FJC3.
OMA	CEPWCSA.
PhylomeDB	Q9FJC3.
ProtClustDB	CLSN2686548.
Gene expression databases
Genevestigator	Q9FJC3.
Family and domain databases
InterPro	IPR012946. X8. [Graphical view]
Pfam	PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FJC3_ARATH

Accession

Primary (citable) accession number: Q9FJC3

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)