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Protein

Ethylene-responsive transcription factor ERF025

Gene

ERF025

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi64 – 12057AP2/ERFPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

  • transcription factor activity, sequence-specific DNA binding Source: TAIR
  • transcription regulatory region DNA binding Source: TAIR

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Activator

Keywords - Biological processi

Ethylene signaling pathway, Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ethylene-responsive transcription factor ERF025
Gene namesi
Name:ERF025
Ordered Locus Names:At5g52020
ORF Names:MSG15.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G52020.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 232232Ethylene-responsive transcription factor ERF025PRO_0000290385Add
BLAST

Proteomic databases

PaxDbiQ9FJ90.

PTM databases

iPTMnetiQ9FJ90.

Expressioni

Gene expression databases

GenevisibleiQ9FJ90. AT.

Interactioni

Protein-protein interaction databases

BioGridi20522. 1 interaction.
STRINGi3702.AT5G52020.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FJ90.
SMRiQ9FJ90. Positions 65-120.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 AP2/ERF DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG410J01J. Eukaryota.
ENOG410YMJJ. LUCA.
HOGENOMiHOG000237624.
InParanoidiQ9FJ90.
OMAiENHEGDN.
OrthoDBiEOG09360RY4.
PhylomeDBiQ9FJ90.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PfamiPF00847. AP2. 1 hit.
[Graphical view]
PRINTSiPR00367. ETHRSPELEMNT.
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9FJ90-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNNNNSPTT VNQETTTSRE VSITLPTDQS PQTSPGSSSS PSPRPSGGSP
60 70 80 90 100
ARRTATGLSG KHSIFRGIRL RNGKWVSEIR EPRKTTRIWL GTYPVPEMAA
110 120 130 140 150
AAYDVAALAL KGPDAVLNFP GLALTYVAPV SNSAADIRAA ASRAAEMKQP
160 170 180 190 200
DQGGDEKVLE PVQPGKEEEL EEVSCNSCSL EFMDEEAMLN MPTLLTEMAE
210 220 230
GMLMSPPRMM IHPTMEDDSP ENHEGDNLWS YK
Length:232
Mass (Da):25,106
Last modified:March 1, 2001 - v1
Checksum:i0191374E36188871
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB015478 Genomic DNA. Translation: BAB11050.1.
CP002688 Genomic DNA. Translation: AED96159.1.
AK176464 mRNA. Translation: BAD44227.1.
AY086443 mRNA. Translation: AAM63446.1.
RefSeqiNP_200015.1. NM_124581.2.
UniGeneiAt.58041.

Genome annotation databases

EnsemblPlantsiAT5G52020.1; AT5G52020.1; AT5G52020.
GeneIDi835277.
GrameneiAT5G52020.1; AT5G52020.1; AT5G52020.
KEGGiath:AT5G52020.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB015478 Genomic DNA. Translation: BAB11050.1.
CP002688 Genomic DNA. Translation: AED96159.1.
AK176464 mRNA. Translation: BAD44227.1.
AY086443 mRNA. Translation: AAM63446.1.
RefSeqiNP_200015.1. NM_124581.2.
UniGeneiAt.58041.

3D structure databases

ProteinModelPortaliQ9FJ90.
SMRiQ9FJ90. Positions 65-120.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi20522. 1 interaction.
STRINGi3702.AT5G52020.1.

PTM databases

iPTMnetiQ9FJ90.

Proteomic databases

PaxDbiQ9FJ90.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G52020.1; AT5G52020.1; AT5G52020.
GeneIDi835277.
GrameneiAT5G52020.1; AT5G52020.1; AT5G52020.
KEGGiath:AT5G52020.

Organism-specific databases

TAIRiAT5G52020.

Phylogenomic databases

eggNOGiENOG410J01J. Eukaryota.
ENOG410YMJJ. LUCA.
HOGENOMiHOG000237624.
InParanoidiQ9FJ90.
OMAiENHEGDN.
OrthoDBiEOG09360RY4.
PhylomeDBiQ9FJ90.

Miscellaneous databases

PROiQ9FJ90.

Gene expression databases

GenevisibleiQ9FJ90. AT.

Family and domain databases

Gene3Di3.30.730.10. 1 hit.
InterProiIPR001471. AP2/ERF_dom.
IPR016177. DNA-bd_dom.
[Graphical view]
PfamiPF00847. AP2. 1 hit.
[Graphical view]
PRINTSiPR00367. ETHRSPELEMNT.
SMARTiSM00380. AP2. 1 hit.
[Graphical view]
SUPFAMiSSF54171. SSF54171. 1 hit.
PROSITEiPS51032. AP2_ERF. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiERF25_ARATH
AccessioniPrimary (citable) accession number: Q9FJ90
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 12, 2007
Last sequence update: March 1, 2001
Last modified: September 7, 2016
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.