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Q9FIN1

- 6PGL4_ARATH

UniProt

Q9FIN1 - 6PGL4_ARATH

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Protein
Probable 6-phosphogluconolactonase 4
Gene
At5g24410, K16H17.12
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate By similarity.

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi

GO - Molecular functioni

  1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

GO - Biological processi

  1. pentose-phosphate shunt Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciARA:AT5G24410-MONOMER.
UniPathwayiUPA00115; UER00409.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 4 (EC:3.1.1.31)
Short name:
6PGL 4
Gene namesi
Ordered Locus Names:At5g24410
ORF Names:K16H17.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 5

Organism-specific databases

TAIRiAT5G24410.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 261261Probable 6-phosphogluconolactonase 4
PRO_0000288671Add
BLAST

Proteomic databases

PaxDbiQ9FIN1.
PRIDEiQ9FIN1.

Expressioni

Gene expression databases

GenevestigatoriQ9FIN1.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G24410.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9FIN1.
SMRiQ9FIN1. Positions 39-257.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ9FIN1.
KOiK01057.
OMAiESIEWSK.
PhylomeDBiQ9FIN1.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FIN1-1 [UniParc]FASTAAdd to Basket

« Hide

MASVLEKTKS KKIVFPTKKE LSEAMATYTA NLSAKFCKER GYFTVVLSGG    50
DLISWLSELL EPKYQESIEW SKWHIFWVDE RVVPLDHEDS NYKLAFDGFL 100
SKVPIPIANI YPIDKDCAAL GDAKSAALLY EECLKRLVNR NIIRTYKSSG 150
FPQFDLQLLG MGPDGHMASL FPGHYQIKEK ANLVTYITDS PKPPPKRITF 200
TLPVINCASY NLMAVCDEAQ ADAVAKVFNH NFDLPAAWLT ADVEAIWFLD 250
QAAASKIPKG L 261
Length:261
Mass (Da):29,244
Last modified:March 1, 2001 - v1
Checksum:i69C2570CF46D73F4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016884 Genomic DNA. Translation: BAB11234.1.
CP002688 Genomic DNA. Translation: AED93308.1.
BT010945 mRNA. Translation: AAR24723.1.
BT012199 mRNA. Translation: AAS76686.1.
RefSeqiNP_197829.1. NM_122349.3.
UniGeneiAt.23941.

Genome annotation databases

EnsemblPlantsiAT5G24410.1; AT5G24410.1; AT5G24410.
GeneIDi832512.
KEGGiath:AT5G24410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016884 Genomic DNA. Translation: BAB11234.1 .
CP002688 Genomic DNA. Translation: AED93308.1 .
BT010945 mRNA. Translation: AAR24723.1 .
BT012199 mRNA. Translation: AAS76686.1 .
RefSeqi NP_197829.1. NM_122349.3.
UniGenei At.23941.

3D structure databases

ProteinModelPortali Q9FIN1.
SMRi Q9FIN1. Positions 39-257.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT5G24410.1-P.

Proteomic databases

PaxDbi Q9FIN1.
PRIDEi Q9FIN1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT5G24410.1 ; AT5G24410.1 ; AT5G24410 .
GeneIDi 832512.
KEGGi ath:AT5G24410.

Organism-specific databases

TAIRi AT5G24410.

Phylogenomic databases

eggNOGi COG0363.
HOGENOMi HOG000256285.
InParanoidi Q9FIN1.
KOi K01057.
OMAi ESIEWSK.
PhylomeDBi Q9FIN1.

Enzyme and pathway databases

UniPathwayi UPA00115 ; UER00409 .
BioCyci ARA:AT5G24410-MONOMER.

Gene expression databases

Genevestigatori Q9FIN1.

Family and domain databases

InterProi IPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view ]
Pfami PF01182. Glucosamine_iso. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01198. pgl. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
    Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
    DNA Res. 5:379-391(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Arabidopsis ORF clones."
    Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.
    Submitted (MAR-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry namei6PGL4_ARATH
AccessioniPrimary (citable) accession number: Q9FIN1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 1, 2001
Last modified: May 14, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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