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Protein

Probable 6-phosphogluconolactonase 4

Gene

At5g24410

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi

GO - Molecular functioni

  1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. pentose-phosphate shunt Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

BioCyciARA:AT5G24410-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).
UniPathwayiUPA00115; UER00409.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 4 (EC:3.1.1.31)
Short name:
6PGL 4
Gene namesi
Ordered Locus Names:At5g24410
ORF Names:K16H17.12
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G24410.

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 261261Probable 6-phosphogluconolactonase 4PRO_0000288671Add
BLAST

Proteomic databases

PaxDbiQ9FIN1.
PRIDEiQ9FIN1.

Expressioni

Gene expression databases

GenevestigatoriQ9FIN1.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G24410.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9FIN1.
SMRiQ9FIN1. Positions 39-257.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ9FIN1.
KOiK01057.
OMAiESIEWSK.
PhylomeDBiQ9FIN1.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FIN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASVLEKTKS KKIVFPTKKE LSEAMATYTA NLSAKFCKER GYFTVVLSGG
60 70 80 90 100
DLISWLSELL EPKYQESIEW SKWHIFWVDE RVVPLDHEDS NYKLAFDGFL
110 120 130 140 150
SKVPIPIANI YPIDKDCAAL GDAKSAALLY EECLKRLVNR NIIRTYKSSG
160 170 180 190 200
FPQFDLQLLG MGPDGHMASL FPGHYQIKEK ANLVTYITDS PKPPPKRITF
210 220 230 240 250
TLPVINCASY NLMAVCDEAQ ADAVAKVFNH NFDLPAAWLT ADVEAIWFLD
260
QAAASKIPKG L
Length:261
Mass (Da):29,244
Last modified:March 1, 2001 - v1
Checksum:i69C2570CF46D73F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016884 Genomic DNA. Translation: BAB11234.1.
CP002688 Genomic DNA. Translation: AED93308.1.
BT010945 mRNA. Translation: AAR24723.1.
BT012199 mRNA. Translation: AAS76686.1.
RefSeqiNP_197829.1. NM_122349.3.
UniGeneiAt.23941.

Genome annotation databases

EnsemblPlantsiAT5G24410.1; AT5G24410.1; AT5G24410.
GeneIDi832512.
KEGGiath:AT5G24410.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016884 Genomic DNA. Translation: BAB11234.1.
CP002688 Genomic DNA. Translation: AED93308.1.
BT010945 mRNA. Translation: AAR24723.1.
BT012199 mRNA. Translation: AAS76686.1.
RefSeqiNP_197829.1. NM_122349.3.
UniGeneiAt.23941.

3D structure databases

ProteinModelPortaliQ9FIN1.
SMRiQ9FIN1. Positions 39-257.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G24410.1-P.

Proteomic databases

PaxDbiQ9FIN1.
PRIDEiQ9FIN1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G24410.1; AT5G24410.1; AT5G24410.
GeneIDi832512.
KEGGiath:AT5G24410.

Organism-specific databases

TAIRiAT5G24410.

Phylogenomic databases

eggNOGiCOG0363.
HOGENOMiHOG000256285.
InParanoidiQ9FIN1.
KOiK01057.
OMAiESIEWSK.
PhylomeDBiQ9FIN1.

Enzyme and pathway databases

UniPathwayiUPA00115; UER00409.
BioCyciARA:AT5G24410-MONOMER.
BRENDAi3.1.1.31. 399.
ReactomeiREACT_281719. Pentose phosphate pathway (hexose monophosphate shunt).

Gene expression databases

GenevestigatoriQ9FIN1.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
    Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
    DNA Res. 5:379-391(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Arabidopsis ORF clones."
    Cheuk R.F., Chen H., Kim C.J., Shinn P., Ecker J.R.
    Submitted (FEB-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry namei6PGL4_ARATH
AccessioniPrimary (citable) accession number: Q9FIN1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: March 1, 2001
Last modified: April 1, 2015
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.