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Q9FIF5 (P2C78_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 78. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Probable protein phosphatase 2C 78

Short name=AtPP2C78
EC=3.1.3.16
Gene names
Ordered Locus Names:At5g59220
ORF Names:MNC17.110
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length413 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity.

Sequence similarities

Belongs to the PP2C family.

Contains 1 PP2C-like domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 413413Probable protein phosphatase 2C 78
PRO_0000367997

Regions

Domain110 – 402293PP2C-like
Compositional bias66 – 705Poly-Arg

Sites

Metal binding1531Manganese 1 By similarity
Metal binding1531Manganese 2 By similarity
Metal binding1541Manganese 1; via carbonyl oxygen By similarity
Metal binding3271Manganese 2 By similarity
Metal binding4001Manganese 2 By similarity

Experimental info

Sequence conflict1031L → F in AAL16163. Ref.3

Sequences

Sequence LengthMass (Da)Tools
Q9FIF5 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 649CF986D17A92D7

FASTA41345,538
        10         20         30         40         50         60 
MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV 

        70         80         90        100        110        120 
DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV VALPDPEAYP KYGVASVCGR 

       130        140        150        160        170        180 
RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA 

       190        200        210        220        230        240 
DWEKSMARSF TRMDMEVVAL NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG 

       250        260        270        280        290        300 
DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL 

       310        320        330        340        350        360 
KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER 

       370        380        390        400        410 
EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD NVSVVVVDLR RDT 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
DNA Res. 5:379-391(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB016890 Genomic DNA. Translation: BAB09767.1.
CP002688 Genomic DNA. Translation: AED97159.1.
AF428395 mRNA. Translation: AAL16163.1.
AY054163 mRNA. Translation: AAL06824.1.
AY074555 mRNA. Translation: AAL67095.1.
RefSeqNP_200730.1. NM_125312.2.
UniGeneAt.22149.

3D structure databases

ProteinModelPortalQ9FIF5.
SMRQ9FIF5. Positions 107-411.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid21284. 5 interactions.
DIPDIP-48992N.
IntActQ9FIF5. 2 interactions.

Proteomic databases

PRIDEQ9FIF5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G59220.1; AT5G59220.1; AT5G59220.
GeneID836040.
KEGGath:AT5G59220.

Organism-specific databases

TAIRAT5G59220.

Phylogenomic databases

eggNOGCOG0631.
HOGENOMHOG000233896.
InParanoidQ9FIF5.
KOK14497.
OMAVSNDTAC.
PhylomeDBQ9FIF5.
ProtClustDBCLSN2914857.

Enzyme and pathway databases

BioCycARA:AT5G59220-MONOMER.

Gene expression databases

GenevestigatorQ9FIF5.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF81606. SSF81606. 2 hits.
ProtoNetSearch...

Entry information

Entry nameP2C78_ARATH
AccessionPrimary (citable) accession number: Q9FIF5
Secondary accession number(s): Q944I7
Entry history
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 1, 2001
Last modified: April 16, 2014
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names