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Q9FIF5

- P2C78_ARATH

UniProt

Q9FIF5 - P2C78_ARATH

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Protein

Probable protein phosphatase 2C 78

Gene

At5g59220

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 5 out of 5- Experimental evidence at transcript leveli

Functioni

Catalytic activityi

[a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

Cofactori

Binds 2 magnesium or manganese ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi153 – 1531Manganese 1By similarity
Metal bindingi153 – 1531Manganese 2By similarity
Metal bindingi154 – 1541Manganese 1; via carbonyl oxygenBy similarity
Metal bindingi327 – 3271Manganese 2By similarity
Metal bindingi400 – 4001Manganese 2By similarity

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein serine/threonine phosphatase activity Source: TAIR

GO - Biological processi

  1. chloroplast organization Source: TAIR
  2. dephosphorylation Source: GOC
  3. leaf senescence Source: TAIR
  4. negative regulation of abscisic acid-activated signaling pathway Source: TAIR
  5. response to abscisic acid Source: TAIR
  6. response to water deprivation Source: TAIR
  7. stomatal movement Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Protein phosphatase

Keywords - Ligandi

Magnesium, Manganese, Metal-binding

Enzyme and pathway databases

BioCyciARA:AT5G59220-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable protein phosphatase 2C 78 (EC:3.1.3.16)
Short name:
AtPP2C78
Gene namesi
Ordered Locus Names:At5g59220
ORF Names:MNC17.110
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 5

Organism-specific databases

TAIRiAT5G59220.

Subcellular locationi

GO - Cellular componenti

  1. cis-Golgi network membrane Source: TAIR
  2. cytosol Source: TAIR
  3. Golgi apparatus Source: TAIR
  4. nucleus Source: TAIR
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 413413Probable protein phosphatase 2C 78PRO_0000367997Add
BLAST

Proteomic databases

PRIDEiQ9FIF5.

Expressioni

Gene expression databases

GenevestigatoriQ9FIF5.

Interactioni

Protein-protein interaction databases

BioGridi21284. 34 interactions.
DIPiDIP-48992N.
IntActiQ9FIF5. 2 interactions.

Structurei

3D structure databases

ProteinModelPortaliQ9FIF5.
SMRiQ9FIF5. Positions 110-410.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini110 – 402293PP2C-likeAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi66 – 705Poly-Arg

Sequence similaritiesi

Belongs to the PP2C family.Curated
Contains 1 PP2C-like domain.Curated

Phylogenomic databases

eggNOGiCOG0631.
HOGENOMiHOG000233896.
InParanoidiQ9FIF5.
KOiK14497.
OMAiCYENETM.
PhylomeDBiQ9FIF5.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 2 hits.

Sequencei

Sequence statusi: Complete.

Q9FIF5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF
60 70 80 90 100
VSGEQEPVFV DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV
110 120 130 140 150
VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG
160 170 180 190 200
VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
210 220 230 240 250
NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG
260 270 280 290 300
KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
310 320 330 340 350
KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV
360 370 380 390 400
NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
410
NVSVVVVDLR RDT
Length:413
Mass (Da):45,538
Last modified:March 1, 2001 - v1
Checksum:i649CF986D17A92D7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti103 – 1031L → F in AAL16163. (PubMed:14593172)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016890 Genomic DNA. Translation: BAB09767.1.
CP002688 Genomic DNA. Translation: AED97159.1.
AF428395 mRNA. Translation: AAL16163.1.
AY054163 mRNA. Translation: AAL06824.1.
AY074555 mRNA. Translation: AAL67095.1.
RefSeqiNP_200730.1. NM_125312.2.
UniGeneiAt.22149.

Genome annotation databases

EnsemblPlantsiAT5G59220.1; AT5G59220.1; AT5G59220.
GeneIDi836040.
KEGGiath:AT5G59220.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AB016890 Genomic DNA. Translation: BAB09767.1 .
CP002688 Genomic DNA. Translation: AED97159.1 .
AF428395 mRNA. Translation: AAL16163.1 .
AY054163 mRNA. Translation: AAL06824.1 .
AY074555 mRNA. Translation: AAL67095.1 .
RefSeqi NP_200730.1. NM_125312.2.
UniGenei At.22149.

3D structure databases

ProteinModelPortali Q9FIF5.
SMRi Q9FIF5. Positions 110-410.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 21284. 34 interactions.
DIPi DIP-48992N.
IntActi Q9FIF5. 2 interactions.

Proteomic databases

PRIDEi Q9FIF5.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT5G59220.1 ; AT5G59220.1 ; AT5G59220 .
GeneIDi 836040.
KEGGi ath:AT5G59220.

Organism-specific databases

TAIRi AT5G59220.

Phylogenomic databases

eggNOGi COG0631.
HOGENOMi HOG000233896.
InParanoidi Q9FIF5.
KOi K14497.
OMAi CYENETM.
PhylomeDBi Q9FIF5.

Enzyme and pathway databases

BioCyci ARA:AT5G59220-MONOMER.

Gene expression databases

Genevestigatori Q9FIF5.

Family and domain databases

Gene3Di 3.60.40.10. 1 hit.
InterProi IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view ]
PANTHERi PTHR13832. PTHR13832. 1 hit.
Pfami PF00481. PP2C. 1 hit.
[Graphical view ]
SMARTi SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view ]
SUPFAMi SSF81606. SSF81606. 2 hits.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
    Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
    DNA Res. 5:379-391(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
    Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
    BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiP2C78_ARATH
AccessioniPrimary (citable) accession number: Q9FIF5
Secondary accession number(s): Q944I7
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: March 1, 2001
Last modified: October 1, 2014
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3