Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative receptor-like protein kinase At5g39000

Gene

At5g39000

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei547 – 5471ATPPROSITE-ProRule annotation
Active sitei646 – 6461Proton acceptorPROSITE-ProRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi524 – 5329ATPPROSITE-ProRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Kinase, Serine/threonine-protein kinase, Transferase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT5G39000-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative receptor-like protein kinase At5g39000 (EC:2.7.11.-)
Gene namesi
Ordered Locus Names:At5g39000
ORF Names:MXF12.2
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G39000.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini22 – 445424ExtracellularSequence analysisAdd
BLAST
Transmembranei446 – 46621HelicalSequence analysisAdd
BLAST
Topological domaini467 – 873407CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2121Sequence analysisAdd
BLAST
Chaini22 – 873852Putative receptor-like protein kinase At5g39000PRO_0000388798Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi49 – 491N-linked (GlcNAc...)Sequence analysis
Glycosylationi64 – 641N-linked (GlcNAc...)Sequence analysis
Glycosylationi138 – 1381N-linked (GlcNAc...)Sequence analysis
Glycosylationi168 – 1681N-linked (GlcNAc...)Sequence analysis
Glycosylationi216 – 2161N-linked (GlcNAc...)Sequence analysis
Glycosylationi266 – 2661N-linked (GlcNAc...)Sequence analysis
Glycosylationi300 – 3001N-linked (GlcNAc...)Sequence analysis
Glycosylationi340 – 3401N-linked (GlcNAc...)Sequence analysis
Glycosylationi437 – 4371N-linked (GlcNAc...)Sequence analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ9FID8.
PRIDEiQ9FID8.

PTM databases

iPTMnetiQ9FID8.

Expressioni

Gene expression databases

GenevisibleiQ9FID8. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G39000.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FID8.
SMRiQ9FID8. Positions 491-802.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini518 – 803286Protein kinasePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.PROSITE-ProRule annotation
Contains 1 protein kinase domain.PROSITE-ProRule annotation

Keywords - Domaini

Signal, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG1187. Eukaryota.
COG0515. LUCA.
HOGENOMiHOG000238317.
InParanoidiQ9FID8.
OMAiHIENSTA.
PhylomeDBiQ9FID8.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR024788. Malectin-like_Carb-bd_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF12819. Malectin_like. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SMARTiSM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FID8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRHALLIFS ILVSTPIVGE GATSTYEPTD VFLFNCGDTS NNVDVSGRNW
60 70 80 90 100
TAENQKILSS NLVNASFTAQ ASYQESGVSQ IPYMTARIFR SEFTYSFPVT
110 120 130 140 150
PGSNFLRLYF YPTRYGSQFN AVKSFFSVKV NGFTLLNNFS ADLTVKASKP
160 170 180 190 200
QTEFIIKEFI IPVYQTLNLT FTPSLDSLAF VNGIEIVSIP NRFYSKGGFD
210 220 230 240 250
DVITNVGSSV DFHIENSTAF ETVYRLNVGG KTVGDSGMFR RWVSDDEIIL
260 270 280 290 300
SESSGISPIV PDIKINYTEK TPSYVAPDDV YATSRSMGNA DHPEQNLNFN
310 320 330 340 350
LTWLFTVDAG FSYLVRLHFC ETLSEVNKEG QRVFSIFIEN QTATLEMDVF
360 370 380 390 400
RMSGGSWIPM YLDYTVIAGS GSGRRHDLRL DLHPLVSINP KYYDAILNGV
410 420 430 440 450
EILKMNDPDG NLAGPNPDPL VSPDLIPNRA TPRIRKNKSH ILPITLAVVG
460 470 480 490 500
SLVVLAMFVV GVLVIMKKKK KSKPSTNSSW CPLPHGTDST NTKPAKSLPA
510 520 530 540 550
DLCRRFSIFE IKSATNDFED KLIIGVGGFG SVYKGQIDGG ATLVAVKRLE
560 570 580 590 600
ITSNQGAKEF ETELEMLSKL RHVHLVSLIG YCDEDNEMVL VYEYMPHGTL
610 620 630 640 650
KDHLFRRDKT SDPPLSWKRR LEICIGAARG LQYLHTGAKY TIIHRDIKTT
660 670 680 690 700
NILLDENFVT KVSDFGLSRV GPTSASQTHV STVVKGTFGY LDPEYYRRQV
710 720 730 740 750
LTEKSDVYSF GVVLLEVLCC RPIRMQSVPP EQADLIRWVK SNYRRGTVDQ
760 770 780 790 800
IIDSDLSADI TSTSLEKFCE IAVRCVQDRG MERPPMNDVV WALEFALQLH
810 820 830 840 850
ETAKKKNDNV ESLDLMPSGE VGTTTDGEDD LFSRTTGHVG KSTTTDDSVL
860 870
VVGDERSGSS WGVFSEINEP KAR
Length:873
Mass (Da):97,164
Last modified:March 1, 2001 - v1
Checksum:iB2879DE5BC7337A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016892 Genomic DNA. Translation: BAB10824.1.
CP002688 Genomic DNA. Translation: AED94385.1.
RefSeqiNP_198716.1. NM_123262.1.
UniGeneiAt.55237.

Genome annotation databases

EnsemblPlantsiAT5G39000.1; AT5G39000.1; AT5G39000.
GeneIDi833892.
GrameneiAT5G39000.1; AT5G39000.1; AT5G39000.
KEGGiath:AT5G39000.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB016892 Genomic DNA. Translation: BAB10824.1.
CP002688 Genomic DNA. Translation: AED94385.1.
RefSeqiNP_198716.1. NM_123262.1.
UniGeneiAt.55237.

3D structure databases

ProteinModelPortaliQ9FID8.
SMRiQ9FID8. Positions 491-802.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G39000.1.

PTM databases

iPTMnetiQ9FID8.

Proteomic databases

PaxDbiQ9FID8.
PRIDEiQ9FID8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G39000.1; AT5G39000.1; AT5G39000.
GeneIDi833892.
GrameneiAT5G39000.1; AT5G39000.1; AT5G39000.
KEGGiath:AT5G39000.

Organism-specific databases

TAIRiAT5G39000.

Phylogenomic databases

eggNOGiKOG1187. Eukaryota.
COG0515. LUCA.
HOGENOMiHOG000238317.
InParanoidiQ9FID8.
OMAiHIENSTA.
PhylomeDBiQ9FID8.

Enzyme and pathway databases

BioCyciARA:AT5G39000-MONOMER.

Miscellaneous databases

PROiQ9FID8.

Gene expression databases

GenevisibleiQ9FID8. AT.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR011009. Kinase-like_dom.
IPR024788. Malectin-like_Carb-bd_dom.
IPR000719. Prot_kinase_dom.
IPR017441. Protein_kinase_ATP_BS.
IPR001245. Ser-Thr/Tyr_kinase_cat_dom.
IPR008271. Ser/Thr_kinase_AS.
[Graphical view]
PfamiPF12819. Malectin_like. 1 hit.
PF07714. Pkinase_Tyr. 1 hit.
[Graphical view]
SMARTiSM00220. S_TKc. 1 hit.
[Graphical view]
SUPFAMiSSF56112. SSF56112. 1 hit.
PROSITEiPS00107. PROTEIN_KINASE_ATP. 1 hit.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
PS00108. PROTEIN_KINASE_ST. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones."
    Asamizu E., Sato S., Kaneko T., Nakamura Y., Kotani H., Miyajima N., Tabata S.
    DNA Res. 5:379-391(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.

Entry informationi

Entry nameiY5900_ARATH
AccessioniPrimary (citable) accession number: Q9FID8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: March 1, 2001
Last modified: May 11, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.