Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q9FHN6 (SKS2_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 77. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Monocopper oxidase-like protein SKS2
Gene names
Name:SKS2
Ordered Locus Names:At5g51480
ORF Names:K17N15.3
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length592 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level

General annotation (Comments)

Cofactor

Copper Potential.

Subcellular location

Cell membrane; Lipid-anchorGPI-anchor.

Sequence similarities

Belongs to the multicopper oxidase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2323 Potential
Chain24 – 564541Monocopper oxidase-like protein SKS2
PRO_0000251281
Propeptide565 – 59228Removed in mature form Potential
PRO_0000251282

Sites

Metal binding4551Copper 2; type 2 By similarity

Amino acid modifications

Lipidation5641GPI-anchor amidated serine Potential
Glycosylation611N-linked (GlcNAc...) Potential
Glycosylation1101N-linked (GlcNAc...) Potential
Glycosylation1721N-linked (GlcNAc...) Potential
Glycosylation2031N-linked (GlcNAc...) Potential
Glycosylation2591N-linked (GlcNAc...) Potential
Glycosylation2801N-linked (GlcNAc...) Potential
Glycosylation2951N-linked (GlcNAc...) Potential
Glycosylation3441N-linked (GlcNAc...) Potential
Glycosylation3641N-linked (GlcNAc...) Potential
Glycosylation4331N-linked (GlcNAc...) Potential
Glycosylation4471N-linked (GlcNAc...) Potential
Glycosylation4761N-linked (GlcNAc...) Potential
Glycosylation5361N-linked (GlcNAc...) Potential

Sequences

Sequence LengthMass (Da)Tools
Q9FHN6 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 7F833E2E7CEEF602

FASTA59266,407
        10         20         30         40         50         60 
MAATDFFFAF VFSFALIFGF SFAGDPYVSY DFTLSYITAS PLGVPQQVIA VNGKFPGPVI 

        70         80         90        100        110        120 
NATTNYNVHV NVLNHLDEPL LLTWPGVQMR RNSWQDGVLG TNCPIPPNWN FTYDFQLKDQ 

       130        140        150        160        170        180 
IGSYFYSPSL NFQRASGGFG ALIINNRDLV PIPFTEPDGE IIFIIGDWYT QNHTALRRIL 

       190        200        210        220        230        240 
DSGKELGMPD GVLINGKGPF KYNSSVPDGI EHETVNVDPG KTYRIRVHNV GISTSLNFRI 

       250        260        270        280        290        300 
QNHKLLLIET EGRYTSQMNF TDFDVHVGQS YSFLVTMDQN ATSDYYIVAS ARFVNETVWQ 

       310        320        330        340        350        360 
RVTGVGILHY SNSKGPASGP LPVSATDVNH PWSAMNQPRA IKQNTSASGA RPNPQGSFHY 

       370        380        390        400        410        420 
GQINITRTYI LRSLPPTKIN GKLRATLNGI SFVNPSTPMR LADDHKVKGD YMLDFPDRPL 

       430        440        450        460        470        480 
DEKLPRLSSS IINATYKGFI QVIFQNNDTK IQSFHIDGYA FYVVAMDFGI WSEDRNSSYN 

       490        500        510        520        530        540 
NWDAVARSTV EVYPGAWTAV LISLDNVGVW NIRVENLDRW YLGQETYMRI INPEENGSTE 

       550        560        570        580        590 
MDPPENVMYC GALQAMQKEQ HHSSATKSMT NGQLILIFSM MMVLLSSFSS FC 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence features of the regions of 3,076,755 bp covered by sixty P1 and TAC clones."
Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H., Tabata S.
DNA Res. 7:31-63(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"Empirical analysis of transcriptional activity in the Arabidopsis genome."
Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. expand/collapse author list , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: cv. Columbia.
[4]"Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins."
Elortza F., Nuehse T.S., Foster L.J., Stensballe A., Peck S.C., Jensen O.N.
Mol. Cell. Proteomics 2:1261-1270(2003) [PubMed] [Europe PMC] [Abstract]
Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS].
[5]"Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment."
Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S., Brodbeck U., Peck S.C., Jensen O.N.
J. Proteome Res. 5:935-943(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB018109 Genomic DNA. Translation: BAB08664.1.
CP002688 Genomic DNA. Translation: AED96089.1.
BT004990 mRNA. Translation: AAO50523.1.
BT004129 mRNA. Translation: AAO42151.1.
RefSeqNP_199961.1. NM_124527.4.
UniGeneAt.29677.

3D structure databases

ProteinModelPortalQ9FHN6.
SMRQ9FHN6. Positions 30-510.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

IntActQ9FHN6. 1 interaction.
STRING3702.AT5G51480.1-P.

Proteomic databases

PaxDbQ9FHN6.
PRIDEQ9FHN6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G51480.1; AT5G51480.1; AT5G51480.
GeneID835222.
KEGGath:AT5G51480.

Organism-specific databases

TAIRAT5G51480.

Phylogenomic databases

eggNOGCOG2132.
HOGENOMHOG000241637.
InParanoidQ9FHN6.
OMANGSTEMD.
PhylomeDBQ9FHN6.
ProtClustDBCLSN2916813.

Enzyme and pathway databases

BioCycARA:GQT-2300-MONOMER.

Gene expression databases

GenevestigatorQ9FHN6.

Family and domain databases

Gene3D2.60.40.420. 3 hits.
InterProIPR001117. Cu-oxidase.
IPR011706. Cu-oxidase_2.
IPR011707. Cu-oxidase_3.
IPR008972. Cupredoxin.
[Graphical view]
PfamPF00394. Cu-oxidase. 1 hit.
PF07731. Cu-oxidase_2. 1 hit.
PF07732. Cu-oxidase_3. 1 hit.
[Graphical view]
SUPFAMSSF49503. SSF49503. 3 hits.
ProtoNetSearch...

Entry information

Entry nameSKS2_ARATH
AccessionPrimary (citable) accession number: Q9FHN6
Entry history
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: March 1, 2001
Last modified: April 16, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names