Unreviewed, UniProtKB/TrEMBL Q9FGZ5 (Q9FGZ5_ARATH)

Names and origin

Protein names

Submitted name:
    Similarity to MADS-box protein EMBL BAB10762.1

Gene names

Ordered Locus Names:

At5g49490 TAIR At5g49490

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	285 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Subcellular location	Nucleus By similarity. RuleBase RU000476V3
Sequence similarities	Contains 1 MADS-box domain. RuleBase RU000476V3 Spearmint SPM002100

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000476V3 Spearmint SPM002100
Cellular component	Nucleus RuleBase RU000476V3 Spearmint SPM002100
Ligand	DNA-binding RuleBase RU000476V3 Spearmint SPM002100
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular function	protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Binary interactions

With	Entry	#Exp.	IntAct	Notes
	Q2V412	1	EBI-622281,EBI-1238781
CAM1	P25854	1	EBI-622281,EBI-1235664
CAM6	Q03509	1	EBI-622281,EBI-1236097
CAM7	P59220	1	EBI-622281,EBI-1236031
CML10	P30187	1	EBI-622281,EBI-1238722
CML8	O23320	1	EBI-622281,EBI-1237764
CML9	Q9S744	1	EBI-622281,EBI-1236048

Sequences

	Sequence		Length	Mass (Da)
	Q9FGZ5-1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 3F1B74303D644D36	FASTA	285	32,426
	10 20 30 40 50 60 MRFVPYLYEI ERLWLSLVNY LSPRKNKNRR CGEIDKIRMV KKGGTKRKIA IETIQKSDYL 70 80 90 100 110 120 RVTCTKRREG LFSKASQLCL LSDAQIAILA TPPTSESNIS FYSFGHSSVD AVVSSFLSGQ 130 140 150 160 170 180 RCVPLQEDTK EMREDVAICL SRTNLGLGFW WNNESLNKSE NPQEISDAIN SMLTLLSNLK 190 200 210 220 230 240 ELSGEEALVN DHKDLKKNER SDVVLQHGTQ YETLNPNSNT TTICCVPDEL PANSNEIVGI 250 260 270 280 SPNPLIMLEK KKSQIEEKFE KEWQVSVTRI ENEATSSYAK RRRSI

References

[1]

"Structural analysis of Arabidopsis thaliana chromosome 5. X. Sequence features of the regions of 3,076,755 bp covered by sixty P1 and TAC clones." Sato S., Nakamura Y., Kaneko T., Katoh T., Asamizu E., Kotani H., Tabata S. DNA Res. 7:31-63(2000) [PubMed: 10718197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB023033 Genomic DNA. Translation: BAB10762.1.
IPI	IPI00518668.
RefSeq	NP_199760.1.
UniGene	At.55456
3D structure databases
ModBase	Search...
Protein-protein interaction databases
IntAct	Q9FGZ5. 9 interactions.
Genome annotation databases
GeneID	835009.
GenomeReviews	Gene locus AT5G49490 in contig BA000015_GR.
KEGG	ath:AT5G49490.
NMPDR	fig|3702.1.peg.26790.
Organism-specific databases
TAIR	At5g49490.
Family and domain databases
InterPro	IPR002100. TF_MADSbox. [Graphical view]
Pfam	PF00319. SRF-TF. 1 hit. [Graphical view]
SMART	SM00432. MADS. 1 hit. [Graphical view]
PROSITE	PS50066. MADS_BOX_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FGZ5_ARATH

Accession

Primary (citable) accession number: Q9FGZ5

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	April 14, 2009
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)