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Protein

Glucan endo-1,3-beta-glucosidase 9

Gene

At5g58480

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei327NucleophileBy similarity1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Cell wall biogenesis/degradation, Plant defense

Enzyme and pathway databases

BioCyciARA:AT5G58480-MONOMER.

Protein family/group databases

CAZyiCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase 9 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase 9
Short name:
(1->3)-beta-glucanase 9
Beta-1,3-endoglucanase 9
Short name:
Beta-1,3-glucanase 9
Gene namesi
Ordered Locus Names:At5g58480
ORF Names:MQJ2.8
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G58480.

Subcellular locationi

GO - Cellular componenti

  • anchored component of membrane Source: TAIR
  • anchored component of plasma membrane Source: TAIR
  • cell wall Source: UniProtKB-SubCell
  • extracellular region Source: UniProtKB-KW
  • plasma membrane Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Cell wall, Membrane, Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 25Sequence analysisAdd BLAST25
ChainiPRO_000025126526 – 453Glucan endo-1,3-beta-glucosidase 9Add BLAST428
PropeptideiPRO_0000251266454 – 476Removed in mature formSequence analysisAdd BLAST23

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi88N-linked (GlcNAc...)Sequence analysis1
Glycosylationi101N-linked (GlcNAc...)Sequence analysis1
Glycosylationi184N-linked (GlcNAc...)Sequence analysis1
Glycosylationi216N-linked (GlcNAc...)Sequence analysis1
Glycosylationi277N-linked (GlcNAc...)Sequence analysis1
Glycosylationi320N-linked (GlcNAc...)Sequence analysis1
Glycosylationi342N-linked (GlcNAc...)Sequence analysis1
Disulfide bondi364 ↔ 424By similarity
Glycosylationi374N-linked (GlcNAc...)Sequence analysis1
Glycosylationi405N-linked (GlcNAc...)Sequence analysis1
Lipidationi453GPI-anchor amidated serineSequence analysis1

Post-translational modificationi

Contains two additional disulfide bonds.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ9FGH4.

Expressioni

Gene expression databases

GenevisibleiQ9FGH4. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G58480.1.

Structurei

3D structure databases

ProteinModelPortaliQ9FGH4.
SMRiQ9FGH4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IJYE. Eukaryota.
ENOG410YE41. LUCA.
HOGENOMiHOG000238221.
InParanoidiQ9FGH4.
OMAiQLMSHPV.
OrthoDBiEOG09360CCA.
PhylomeDBiQ9FGH4.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTiSM00768. X8. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9FGH4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARRLFLLLL AVTAGLSLTG TTVRAVGINW GTEASHPLPP SKVVELLKSN
60 70 80 90 100
GIVKVKLFDA DPKVLRALSG SNIGVTIGIQ NSMLKSLNAS VKVAESWVHD
110 120 130 140 150
NVTRYFNGGN RVRIEYVAVG EEPFLQSYGN QYKPFVIGAA MNIQNALVKA
160 170 180 190 200
NLANEVKVVV PSSFDSFLSE SGRPSSGHFR ADLNKTMIEL LSFLTKHHSP
210 220 230 240 250
FFVTISPFLS FHQNKNISLD FSLFKETAKA HKDGRKTYRN SFDLSYDTLV
260 270 280 290 300
SALFTIGFSE VDIVVSKIGW PTDGAENATS LTAEAFFKGL IVHLEKKTAS
310 320 330 340 350
LPRPPVETYI ESLLDEDQRN LSAGNFERHW GVFTFDGQAK YNFSFNHKNQ
360 370 380 390 400
VNAQNVQYLP PKWCVVNNNK DLSNASARAL EACAVADCTS ILPGGSCSGI
410 420 430 440 450
RWPGNVSYAF NSLYQQNDHS AESCNFGGLG LITTVDPSED NCRFSIQLDT
460 470
SHSSSQTPNF FQSWPLLLLF LLSGLF
Length:476
Mass (Da):52,370
Last modified:March 1, 2001 - v1
Checksum:i00CC6739B10CBB20
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB025632 Genomic DNA. Translation: BAB10263.1.
CP002688 Genomic DNA. Translation: AED97058.1.
BT005117 mRNA. Translation: AAO50650.1.
BT003904 mRNA. Translation: AAO41952.1.
RefSeqiNP_200656.2. NM_125234.4.
UniGeneiAt.29278.

Genome annotation databases

EnsemblPlantsiAT5G58480.1; AT5G58480.1; AT5G58480.
GeneIDi835961.
GrameneiAT5G58480.1; AT5G58480.1; AT5G58480.
KEGGiath:AT5G58480.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB025632 Genomic DNA. Translation: BAB10263.1.
CP002688 Genomic DNA. Translation: AED97058.1.
BT005117 mRNA. Translation: AAO50650.1.
BT003904 mRNA. Translation: AAO41952.1.
RefSeqiNP_200656.2. NM_125234.4.
UniGeneiAt.29278.

3D structure databases

ProteinModelPortaliQ9FGH4.
SMRiQ9FGH4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G58480.1.

Protein family/group databases

CAZyiCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PaxDbiQ9FGH4.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G58480.1; AT5G58480.1; AT5G58480.
GeneIDi835961.
GrameneiAT5G58480.1; AT5G58480.1; AT5G58480.
KEGGiath:AT5G58480.

Organism-specific databases

TAIRiAT5G58480.

Phylogenomic databases

eggNOGiENOG410IJYE. Eukaryota.
ENOG410YE41. LUCA.
HOGENOMiHOG000238221.
InParanoidiQ9FGH4.
OMAiQLMSHPV.
OrthoDBiEOG09360CCA.
PhylomeDBiQ9FGH4.

Enzyme and pathway databases

BioCyciARA:AT5G58480-MONOMER.

Miscellaneous databases

PROiQ9FGH4.

Gene expression databases

GenevisibleiQ9FGH4. AT.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
PfamiPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTiSM00768. X8. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE139_ARATH
AccessioniPrimary (citable) accession number: Q9FGH4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 3, 2006
Last sequence update: March 1, 2001
Last modified: November 30, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.