Glucan endo-1,3-beta-glucosidase 9 precursor - Arabidopsis thaliana (Mouse-ear cress)

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Q9FGH4 (E139_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 81. History...

Clusters with 100%, 90%, 50% identity |

Documents (3) |

Third-party data

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents Customize order

Names and origin

Protein names

Recommended name:
Glucan endo-1,3-beta-glucosidase 9
EC=3.2.1.39

Alternative name(s):
(1->3)-beta-glucan endohydrolase 9
Short name=(1->3)-beta-glucanase 9
Beta-1,3-endoglucanase 9
Short name=Beta-1,3-glucanase 9

Gene names

Ordered Locus Names:	At5g58480
ORF Names:	MQJ2.8

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	476 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

General annotation (Comments)

Catalytic activity	Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.
Subcellular location	Secreted › cell wall Potential. Cell membrane; Lipid-anchor › GPI-anchor; Extracellular side.
Sequence similarities	Belongs to the glycosyl hydrolase 17 family.

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation Plant defense
Cellular component	Cell membrane Cell wall Membrane Secreted
Domain	Signal
Molecular function	Glycosidase Hydrolase
PTM	GPI-anchor Glycoprotein Lipoprotein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro defense response Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	anchored to plasma membrane Inferred from direct assay Ref.4. Source: TAIR cell wall Inferred from electronic annotation. Source: UniProtKB-SubCell extracellular region Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	glucan endo-1,3-beta-D-glucosidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

25

Potential

Chain

428

Glucan endo-1,3-beta-glucosidase 9

PRO_0000251265

Propeptide

23

Removed in mature form Potential

PRO_0000251266

Sites

Active site

1

Nucleophile By similarity

Amino acid modifications

Lipidation

1

GPI-anchor amidated serine Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Glycosylation

1

N-linked (GlcNAc...) Potential

Sequences

Sequence

Length

Mass (Da)

Tools

Q9FGH4 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 00CC6739B10CBB20
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476

52,370

        10         20         30         40         50         60 
MARRLFLLLL AVTAGLSLTG TTVRAVGINW GTEASHPLPP SKVVELLKSN GIVKVKLFDA 

        70         80         90        100        110        120 
DPKVLRALSG SNIGVTIGIQ NSMLKSLNAS VKVAESWVHD NVTRYFNGGN RVRIEYVAVG 

       130        140        150        160        170        180 
EEPFLQSYGN QYKPFVIGAA MNIQNALVKA NLANEVKVVV PSSFDSFLSE SGRPSSGHFR 

       190        200        210        220        230        240 
ADLNKTMIEL LSFLTKHHSP FFVTISPFLS FHQNKNISLD FSLFKETAKA HKDGRKTYRN 

       250        260        270        280        290        300 
SFDLSYDTLV SALFTIGFSE VDIVVSKIGW PTDGAENATS LTAEAFFKGL IVHLEKKTAS 

       310        320        330        340        350        360 
LPRPPVETYI ESLLDEDQRN LSAGNFERHW GVFTFDGQAK YNFSFNHKNQ VNAQNVQYLP 

       370        380        390        400        410        420 
PKWCVVNNNK DLSNASARAL EACAVADCTS ILPGGSCSGI RWPGNVSYAF NSLYQQNDHS 

       430        440        450        460        470 
AESCNFGGLG LITTVDPSED NCRFSIQLDT SHSSSQTPNF FQSWPLLLLF LLSGLF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. XI." Kaneko T., Katoh T., Asamizu E., Sato S., Nakamura Y., Kotani H., Tabata S. Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R. Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Proteomic analysis of glycosylphosphatidylinositol-anchored membrane proteins." Elortza F., Nuehse T.S., Foster L.J., Stensballe A., Peck S.C., Jensen O.N. Mol. Cell. Proteomics 2:1261-1270(2003) [PubMed] [Europe PMC] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
[5]	"Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment." Elortza F., Mohammed S., Bunkenborg J., Foster L.J., Nuehse T.S., Brodbeck U., Peck S.C., Jensen O.N. J. Proteome Res. 5:935-943(2006) [PubMed] [Europe PMC] [Abstract] Cited for: GPI-ANCHOR [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB025632 Genomic DNA. Translation: BAB10263.1. CP002688 Genomic DNA. Translation: AED97058.1. BT005117 mRNA. Translation: AAO50650.1. BT003904 mRNA. Translation: AAO41952.1.
IPI	IPI00542691.
RefSeq	NP_200656.2. NM_125234.3.
UniGene	At.29278.
3D structure databases
HSSP	HSSP built from PDB template 2CYG based on UniProtKB O22317.
ProteinModelPortal	Q9FGH4.
SMR	Q9FGH4. Positions 26-345, 353-447.
ModBase	Search...
Protein-protein interaction databases
STRING	3702.AT5G58480.1-P.
Protein family/group databases
CAZy	CBM43. Carbohydrate-Binding Module Family 43. GH17. Glycoside Hydrolase Family 17.
Proteomic databases
PaxDb	Q9FGH4.
PRIDE	Q9FGH4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G58480.1; AT5G58480.1; AT5G58480.
GeneID	835961.
KEGG	ath:AT5G58480.
Organism-specific databases
TAIR	At5g58480.
Phylogenomic databases
eggNOG	NOG266375.
HOGENOM	HOG000238221.
InParanoid	Q9FGH4.
OMA	KVAESWV.
PhylomeDB	Q9FGH4.
ProtClustDB	CLSN2918413.
Gene expression databases
Genevestigator	Q9FGH4.
GermOnline	AT5G58480. Arabidopsis thaliana.
Family and domain databases
Gene3D	3.20.20.80. 1 hit.
InterPro	IPR000490. Glyco_hydro_17. IPR013781. Glyco_hydro_catalytic_dom. IPR017853. Glycoside_hydrolase_SF. IPR012946. X8. [Graphical view]
Pfam	PF00332. Glyco_hydro_17. 1 hit. PF07983. X8. 1 hit. [Graphical view]
SMART	SM00768. X8. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS00587. GLYCOSYL_HYDROL_F17. False negative. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E139_ARATH

Accession

Primary (citable) accession number: Q9FGH4

Entry history

Integrated into UniProtKB/Swiss-Prot:	October 3, 2006
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 81 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program

Relevant documents

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names

SIMILARITY comments

Index of protein domains and families

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Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·Documents