Q9FFY2 (Q9FFY2_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Emb|CAB86673.1 EMBL BAB11120.1

Submitted name:
Endonuclease VIII-like 3 EMBL AED91960.1

Gene names

Ordered Locus Names:	At5g13920 TAIR At5g13920
ORF Names:	AT5G13920 EMBL AED91960.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	415 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Zinc-finger RuleBase RU000338
Ligand	Metal-binding Zinc
Molecular function	Endonuclease EMBL AED91960.1 Hydrolase Nuclease
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	endonuclease activity Inferred from electronic annotation. Source: UniProtKB-KW nucleic acid binding Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9FFY2 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 8B06C51FF2F9D24E	FASTA	415	46,313
	10 20 30 40 50 60 MLNGTMQTGD CFRCRQAGHW INDCPLKSYT DDPPPAIQCP CGGGFCEIKV ANTRENPGRK 70 80 90 100 110 120 FYKCPTAQNC CFFKWCDKVT DEDIKFRPAF TIPICSCGAG PCRRVKDVSG RAYLICCIKK 130 140 150 160 170 180 GFGACGFFKW EDVEMIPSCD VMDEIDFWVE ADQILSDVES SLQARGGVIP EIANQMASEK 190 200 210 220 230 240 ECQASVSGIE DDCVVECQDS VSAEDDSTLE NLDSISMSVS DVHSTALNQG ISLFDPVTSE 250 260 270 280 290 300 PEEPWKKTQN GDQPTNSALS KLSVDEAMSD LIRDTVSSGS VVIHGRTNHE QPEIDGAEWS 310 320 330 340 350 360 FPCLQNLIDQ YNSEKLQLES ISGKHVQMLS EFMASYRRLR LLHEKTSHLR KTLLETEKEM 370 380 390 400 410 VCCEAETLKF GASCREVAGE MAESQKRMQE TADKLGKEVE VFKQNEFVGL KRRRT

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones." Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M., Miyajima N., Tabata S. DNA Res. 4:215-230(1997) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002688 Genomic DNA. Translation: AED91960.1. AB005230 Genomic DNA. Translation: BAB11120.1.
IPI	IPI00528169.
RefSeq	NP_196896.1. NM_121395.1.
UniGene	At.54840.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	3702.AT5G13920.1-P.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT5G13920.1; AT5G13920.1; AT5G13920.
GeneID	831239.
KEGG	ath:AT5G13920.
Organism-specific databases
TAIR	At5g13920.
Phylogenomic databases
eggNOG	NOG276344.
HOGENOM	HOG000152446.
KO	K10569.
OMA	ANTRENP.
ProtClustDB	CLSN2682434.
Gene expression databases
Genevestigator	Q9FFY2.
Family and domain databases
Gene3D	4.10.60.10. 1 hit.
InterPro	IPR001878. Znf_CCHC. IPR010666. Znf_GRF. [Graphical view]
Pfam	PF00098. zf-CCHC. 1 hit. PF06839. zf-GRF. 1 hit. [Graphical view]
SMART	SM00343. ZnF_C2HC. 1 hit. [Graphical view]
PROSITE	PS50158. ZF_CCHC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9FFY2_ARATH

Accession

Primary (citable) accession number: Q9FFY2

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)