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Q9FF93 (Q9FF93_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Pectinacetylesterase family protein EMBL AED93227.1
Gene names
Ordered Locus Names:At5g23870 TAIR At5g23870
ORF Names:AT5G23870 EMBL AED93227.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL BAB10060.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length415 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q9FF93 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 0E06EE107DFD3EEE

FASTA41545,963
        10         20         30         40         50         60 
MKTTTRLLDL TAAMVLVVYV SFSPPLVSGE PGRRVSMTLV RDAAALGAFC LDGSLPAYHL 

        70         80         90        100        110        120 
DRGFGAGSNN WILQFEGGGW CNDIASCVER AKTRRGSTRY MSKTVVFTGV LSNNASQNPD 

       130        140        150        160        170        180 
FYNWNKVRLR YCDGASFAGD SQFGNGTSLL YFRGQRIWNA IILDLLPKGL AKAHKALLTG 

       190        200        210        220        230        240 
CSAGGLSTFL HCDNFTSYLP KNASVKCMSD AGFFLDAIDV AANRTMRSFY SQLVSLQGIQ 

       250        260        270        280        290        300 
KNLDPSCTHA FFPEPSLCFF PQYVLRFIKT PFFILNSAYD VFQFHHGLVP PSADQTGRWN 

       310        320        330        340        350        360 
RCKLNVTACN PHQLDALQGF RKDMLGALMN FFRNSTRGGM FINSCFDHCQ SALEETWLSP 

       370        380        390        400        410 
TSPRINNKTI AETVGDWYFG RGEEAKEIGC PYPCDKTCHN LIPASTSDFL VNLDI 

« Hide

References

« Hide 'large scale' references
[1]"Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones."
Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M., Miyajima N., Tabata S.
DNA Res. 4:215-230(1997) [PubMed: 9330910] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002688 Genomic DNA. Translation: AED93227.1.
AB005244 Genomic DNA. Translation: BAB10060.1.
IPIIPI00544813.
RefSeqNP_197775.3. NM_122292.3.
UniGeneAt.27404.

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEQ9FF93.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G23870.1; AT5G23870.1; AT5G23870.
GeneID832452.
KEGGath:AT5G23870.
NMPDRfig|3702.1.peg.24567.

Organism-specific databases

TAIRAt5g23870.

Phylogenomic databases

GeneTreeEPGT00050000006142.
PhylomeDBQ9FF93.
ProtClustDBCLSN2681065.

Gene expression databases

GenevestigatorQ9FF93.

Family and domain databases

InterProIPR004963. Pec_acetylest.
[Graphical view]
PANTHERPTHR21562:SF1. Pec_acetylest. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9FF93_ARATH
AccessionPrimary (citable) accession number: Q9FF93
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 25, 2012
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)