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Protein
Submitted name:

Uncharacterized protein

Gene

At5g23890

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:At5g23890Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

TAIRiAT5G23890.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei91 – 11424HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • chloroplast Source: TAIR
  • chloroplast envelope Source: TAIR
  • chloroplast thylakoid membrane Source: TAIR
  • integral component of membrane Source: UniProtKB-KW
  • mitochondrion Source: TAIR
  • plastid Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi3702.AT5G23890.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini494 – 56875SLH (S-layer homology)InterPro annotationAdd
BLAST
Domaini573 – 64169SLH (S-layer homology)InterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili668 – 74881Sequence analysisAdd
BLAST
Coiled coili752 – 77928Sequence analysisAdd
BLAST
Coiled coili784 – 81128Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IGNC. Eukaryota.
ENOG4110AAG. LUCA.
OMAiISKLQYE.
OrthoDBiEOG093602T6.
PhylomeDBiQ9FF91.

Family and domain databases

InterProiIPR001119. SLH_dom.
[Graphical view]
PROSITEiPS51272. SLH. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9FF91-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASATATWTP TSLQLRLALS SGVRRKSPAV YLRPSRLARK SGYGIVCVSQ
60 70 80 90 100
KPEVDAWTGS DSSKSSADNL AGWDDSDNDD KKSSRVKKKS LIEGVVGAGV
110 120 130 140 150
AGIILFLGLS YAAASFSKRT KKQEMHSLTS QQESMIQSSD EISSDEIKVA
160 170 180 190 200
NSEESNLKDE DKSIESNDVA QKSDEGSGED KLLGKETSSF DGVMTDEADA
210 220 230 240 250
TESIPQNTPE ADLMVNAETD PETAESEKII SESKSLLDSS TEPILLDAES
260 270 280 290 300
SNLVGVENTN SEDPESLLNT EPTNVSDLEN HVNSQKEDSL SSLSGIDAYA
310 320 330 340 350
ASGTVTELPE VSSQLDSTSK PQIVPLNDTE TAFATAEELS EVNGTPEYFE
360 370 380 390 400
TSDWSSISDI DTTKELESSK SPVPESTDGS KDELNIYSQD ELDDNRMLLE
410 420 430 440 450
IPSGGSAFSS AGIPAPFMSV IVNPGKILVP VAADQIQCQA FAALQVLKVI
460 470 480 490 500
ETDTQPSDLC TRREYARWLI SASSALSRNT TSKVYPAMYI ENVTELAFDD
510 520 530 540 550
ITPEDPDFSS IQGLAEAGLI ASKLSNRDLL DDVEGTFLFS PESLLSRQDL
560 570 580 590 600
ISWKMALEKR QLPEADKKML YKLSGFIDID KINPDAWPSI IADLSTGEQG
610 620 630 640 650
IAALAFGCTR LFQPHKPVTK GQAAIALSSG EASDIVSEEL ARIEAESMAE
660 670 680 690 700
KAVSAHNALV AEVEKDVNAS FEKELSMERE KIEAVEKMAE LAKVELEQLR
710 720 730 740 750
EKREEENLAL VKERAAVESE MEVLSRLRRD AEEKLEDLMS NKAEITFEKE
760 770 780 790 800
RVFNLRKEAE EESQRISKLQ YELEVERKAL SMARSWAEEE AKKAREQGRA
810 820 830 840 850
LEEARKRWET NGLRVVVDKD LQETSSRETE QSIVLNEMER SSVEETERRA
860 870 880 890 900
KTLMDKLKEM AGTVSGKSRE VIFTVMEKIR LWITVLKEYA VNLGKRAGEM
910 920 930 940
RDAAIVRAKG AAADVEQGTV QVSDKVKKMA EECRDGVGKI SQRFKT
Length:946
Mass (Da):103,927
Last modified:March 1, 2001 - v1
Checksum:i210BDEF89679B689
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA. Translation: AED93229.1.
AB005244 Genomic DNA. Translation: BAB10062.1.
RefSeqiNP_197777.1. NM_122294.3.
UniGeneiAt.19700.

Genome annotation databases

EnsemblPlantsiAT5G23890.1; AT5G23890.1; AT5G23890.
GeneIDi832454.
GrameneiAT5G23890.1; AT5G23890.1; AT5G23890.
KEGGiath:AT5G23890.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA. Translation: AED93229.1.
AB005244 Genomic DNA. Translation: BAB10062.1.
RefSeqiNP_197777.1. NM_122294.3.
UniGeneiAt.19700.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT5G23890.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT5G23890.1; AT5G23890.1; AT5G23890.
GeneIDi832454.
GrameneiAT5G23890.1; AT5G23890.1; AT5G23890.
KEGGiath:AT5G23890.

Organism-specific databases

TAIRiAT5G23890.

Phylogenomic databases

eggNOGiENOG410IGNC. Eukaryota.
ENOG4110AAG. LUCA.
OMAiISKLQYE.
OrthoDBiEOG093602T6.
PhylomeDBiQ9FF91.

Family and domain databases

InterProiIPR001119. SLH_dom.
[Graphical view]
PROSITEiPS51272. SLH. 2 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9FF91_ARATH
AccessioniPrimary (citable) accession number: Q9FF91
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: September 7, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.