Reviewed,
UniProtKB/Swiss-Prot Q9FF17 (ALG6_ARATH)
Last modified
June 16, 2009.
Version 50.
History...
Clusters with 100%,
90%,
50% identity |
Documents (3) |
Third-party data |
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Names and origin
| Protein names | Recommended name: Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase EC=2.4.1.- Alternative name(s): Dolichyl-P-Glc:Man9GlcNAc2-PP-dolichyl glucosyltransferase Asparagine-linked glycosylation protein 6 | ||||
| Gene names |
| ||||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||
| Taxonomic identifier | 3702 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 533 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Function | Adds the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Man9GlcNAc(2)-PP-Dol By similarity. |
| Pathway | |
| Subcellular location | Endoplasmic reticulum membrane; Multi-pass membrane protein Potential. |
| Sequence similarities | Belongs to the ALG6/ALG8 glucosyltransferase family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Endoplasmic reticulum Membrane |
| Domain | Transmembrane |
| Molecular function | Glycosyltransferase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | endoplasmic reticulum membrane Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membraneInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 533 | 533 | Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase | PRO_0000174159 | |||||
Regions | |||||||||
| Transmembrane | 42 – 64 | 23 | Potential | ||||||
| Transmembrane | 149 – 169 | 21 | Potential | ||||||
| Transmembrane | 184 – 204 | 21 | Potential | ||||||
| Transmembrane | 214 – 234 | 21 | Potential | ||||||
| Transmembrane | 264 – 284 | 21 | Potential | ||||||
| Transmembrane | 360 – 380 | 21 | Potential | ||||||
| Transmembrane | 422 – 442 | 21 | Potential | ||||||
| Transmembrane | 463 – 483 | 21 | Potential | ||||||
| Transmembrane | 491 – 511 | 21 | Potential | ||||||
Sequences
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References
| [1] | "Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones." Sato S., Kotani H., Nakamura Y., Kaneko T., Asamizu E., Fukami M., Miyajima N., Tabata S. DNA Res. 4:215-230(1997) [PubMed: 9330910] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia. |
| [2] | "Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. Ecker J.R.Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia. |
Cross-references
Sequence databases | |
|---|---|
| AB005248 Genomic DNA. Translation: BAB09358.1. AY035066 mRNA. Translation: AAK59571.1. AY056364 mRNA. Translation: AAL07250.1. | |
| IPI | IPI00519459. |
| RefSeq | NP_198662.1. |
| UniGene | At.7253 |
3D structure databases | |
| ModBase | Search... |
Protein family/group databases | |
| CAZy | GT57. Glycosyltransferase Family 57. |
Proteomic databases | |
| PRIDE | Q9FF17. |
Genome annotation databases | |
| GeneID | 833834. |
| GenomeReviews | Gene locus AT5G38460 in contig BA000015_GR. |
| KEGG | ath:AT5G38460. |
| NMPDR | fig|3702.1.peg.25538. |
Organism-specific databases | |
| TAIR | At5g38460. |
Phylogenomic databases | |
| OMA | Q9FF17. FFCYLLG. |
Gene expression databases | |
| ArrayExpress | Q9FF17. |
| GermOnline | AT5G38460. Arabidopsis thaliana. |
Family and domain databases | |
| InterPro | IPR004856. Glycosyltransferase_ALG6/ALG8. [Graphical view] |
| PANTHER | PTHR12413. Alg6_Alg8. 1 hit. |
| Pfam | PF03155. Alg6_Alg8. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | ALG6_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9FF17 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | PPAP (Plant Proteome Annotation Project) | ||||||||
Relevant documents
| Arabidopsis thaliana Arabidopsis thaliana: entries and gene names |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


