SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q9FE98

- TAR3_ARATH

UniProt

Q9FE98 - TAR3_ARATH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Tryptophan aminotransferase-related protein 3

Gene
TAR3, At1g34040, F12G12.14, T15K4.10
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Probable aminotransferase By similarity.

Cofactori

Pyridoxal phosphate By similarity.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei123 – 1231Pyridoxal phosphate By similarity
Binding sitei237 – 2371Pyridoxal phosphate By similarity
Binding sitei257 – 2571Pyridoxal phosphate By similarity
Binding sitei291 – 2911Pyridoxal phosphate By similarity

GO - Molecular functioni

  1. carbon-sulfur lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
  3. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Aminotransferase, Transferase

Keywords - Ligandi

Pyridoxal phosphate

Enzyme and pathway databases

BioCyciARA:AT1G34040-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Tryptophan aminotransferase-related protein 3 (EC:2.6.1.-)
Gene namesi
Name:TAR3
Ordered Locus Names:At1g34040
ORF Names:F12G12.14, T15K4.10
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 1

Organism-specific databases

TAIRiAT1G34040.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2621Helical; Reviewed predictionAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 457457Tryptophan aminotransferase-related protein 3PRO_0000411676Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei283 – 2831N6-(pyridoxal phosphate)lysine Reviewed prediction

Proteomic databases

PaxDbiQ9FE98.
PRIDEiQ9FE98.

Expressioni

Gene expression databases

GenevestigatoriQ9FE98.

Structurei

3D structure databases

ProteinModelPortaliQ9FE98.
SMRiQ9FE98. Positions 33-447.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni163 – 1642Pyridoxal phosphate binding By similarity
Regioni257 – 2604Pyridoxal phosphate binding By similarity
Regioni280 – 2834Pyridoxal phosphate binding By similarity

Sequence similaritiesi

Belongs to the alliinase family.

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG290378.
HOGENOMiHOG000237549.
InParanoidiQ9FE98.
OMAiMFLEPFW.
PhylomeDBiQ9FE98.

Family and domain databases

Gene3Di2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF04864. Alliinase_C. 1 hit.
PF04863. EGF_alliinase. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9FE98-1 [UniParc]FASTAAdd to Basket

« Hide

MIHNKLLIAG SIILNLVFTI HILYNNTSTW SPTWTNRAAL EAEAAASVSC    50
SGHGRSYVDG LGVLDGHKPC ECHDCYTGKD CSVLLKDCPV DANSGDPLFL 100
EPFWIRKAEE SAVVESGWHR MSYTFNGYGL FMSAELEKII RKLHNVVGNA 150
VTDNRFIIFG AGATQLLAAS VHALSQTNSL SPSRLVTSVP YYNLYKQQAD 200
FFNSTNLKFE GDASAWKRSE RNDDIKQVIE IVTSPNNPDG KLKRAVLDGP 250
NVKYIHDYAY YWPYFSPITR QADEDLSLFS LSKTTGHAGS RFGWALVKEK 300
TVYEKMKIYI SLSSMGVSRD TQLRALQLLK VVIGDGGNEI FRFGYGTLKK 350
RWEILNKIFS MSTRFSLETI KPEYCNYFKK VREFTPSYAW VKCERPEDTD 400
CYEIFKAAKI TGRNGEMFGS DERFVRLSLI RSQDDFDQLI AMLKKFVSKE 450
AVVVDSI 457
Length:457
Mass (Da):51,654
Last modified:March 1, 2001 - v1
Checksum:i61C6E00B734DDE61
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC015446 Genomic DNA. Translation: AAG12533.1.
AC079286 Genomic DNA. Translation: AAG12844.1.
CP002684 Genomic DNA. Translation: AEE31660.1.
PIRiC86464.
RefSeqiNP_174666.1. NM_103126.1.
UniGeneiAt.51925.

Genome annotation databases

EnsemblPlantsiAT1G34040.1; AT1G34040.1; AT1G34040.
GeneIDi840301.
KEGGiath:AT1G34040.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC015446 Genomic DNA. Translation: AAG12533.1 .
AC079286 Genomic DNA. Translation: AAG12844.1 .
CP002684 Genomic DNA. Translation: AEE31660.1 .
PIRi C86464.
RefSeqi NP_174666.1. NM_103126.1.
UniGenei At.51925.

3D structure databases

ProteinModelPortali Q9FE98.
SMRi Q9FE98. Positions 33-447.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi Q9FE98.
PRIDEi Q9FE98.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT1G34040.1 ; AT1G34040.1 ; AT1G34040 .
GeneIDi 840301.
KEGGi ath:AT1G34040.

Organism-specific databases

TAIRi AT1G34040.

Phylogenomic databases

eggNOGi NOG290378.
HOGENOMi HOG000237549.
InParanoidi Q9FE98.
OMAi MFLEPFW.
PhylomeDBi Q9FE98.

Enzyme and pathway databases

BioCyci ARA:AT1G34040-MONOMER.

Gene expression databases

Genevestigatori Q9FE98.

Family and domain databases

Gene3Di 2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProi IPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view ]
Pfami PF04864. Alliinase_C. 1 hit.
PF04863. EGF_alliinase. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development."
    Stepanova A.N., Robertson-Hoyt J., Yun J., Benavente L.M., Xie D.Y., Dolezal K., Schlereth A., Juergens G., Alonso J.M.
    Cell 133:177-191(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.
  4. "Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants."
    Tao Y., Ferrer J.L., Ljung K., Pojer F., Hong F., Long J.A., Li L., Moreno J.E., Bowman M.E., Ivans L.J., Cheng Y., Lim J., Zhao Y., Ballare C.L., Sandberg G., Noel J.P., Chory J.
    Cell 133:164-176(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTAR3_ARATH
AccessioniPrimary (citable) accession number: Q9FE98
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 27, 2011
Last sequence update: March 1, 2001
Last modified: May 14, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi