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Q9FE98 (TAR3_ARATH) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Tryptophan aminotransferase-related protein 3

EC=2.6.1.-
Gene names
Name:TAR3
Ordered Locus Names:At1g34040
ORF Names:F12G12.14, T15K4.10
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Probable aminotransferase By similarity.

Cofactor

Pyridoxal phosphate By similarity.

Subcellular location

Membrane; Single-pass membrane protein Potential.

Sequence similarities

Belongs to the alliinase family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 457457Tryptophan aminotransferase-related protein 3
PRO_0000411676

Regions

Transmembrane6 – 2621Helical; Potential
Region163 – 1642Pyridoxal phosphate binding By similarity
Region257 – 2604Pyridoxal phosphate binding By similarity
Region280 – 2834Pyridoxal phosphate binding By similarity

Sites

Binding site1231Pyridoxal phosphate By similarity
Binding site2371Pyridoxal phosphate By similarity
Binding site2571Pyridoxal phosphate By similarity
Binding site2911Pyridoxal phosphate By similarity

Amino acid modifications

Modified residue2831N6-(pyridoxal phosphate)lysine Potential

Sequences

Sequence LengthMass (Da)Tools
Q9FE98 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 61C6E00B734DDE61

FASTA45751,654
        10         20         30         40         50         60 
MIHNKLLIAG SIILNLVFTI HILYNNTSTW SPTWTNRAAL EAEAAASVSC SGHGRSYVDG 

        70         80         90        100        110        120 
LGVLDGHKPC ECHDCYTGKD CSVLLKDCPV DANSGDPLFL EPFWIRKAEE SAVVESGWHR 

       130        140        150        160        170        180 
MSYTFNGYGL FMSAELEKII RKLHNVVGNA VTDNRFIIFG AGATQLLAAS VHALSQTNSL 

       190        200        210        220        230        240 
SPSRLVTSVP YYNLYKQQAD FFNSTNLKFE GDASAWKRSE RNDDIKQVIE IVTSPNNPDG 

       250        260        270        280        290        300 
KLKRAVLDGP NVKYIHDYAY YWPYFSPITR QADEDLSLFS LSKTTGHAGS RFGWALVKEK 

       310        320        330        340        350        360 
TVYEKMKIYI SLSSMGVSRD TQLRALQLLK VVIGDGGNEI FRFGYGTLKK RWEILNKIFS 

       370        380        390        400        410        420 
MSTRFSLETI KPEYCNYFKK VREFTPSYAW VKCERPEDTD CYEIFKAAKI TGRNGEMFGS 

       430        440        450 
DERFVRLSLI RSQDDFDQLI AMLKKFVSKE AVVVDSI 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. expand/collapse author list , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
[3]"TAA1-mediated auxin biosynthesis is essential for hormone crosstalk and plant development."
Stepanova A.N., Robertson-Hoyt J., Yun J., Benavente L.M., Xie D.Y., Dolezal K., Schlereth A., Juergens G., Alonso J.M.
Cell 133:177-191(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.
[4]"Rapid synthesis of auxin via a new tryptophan-dependent pathway is required for shade avoidance in plants."
Tao Y., Ferrer J.L., Ljung K., Pojer F., Hong F., Long J.A., Li L., Moreno J.E., Bowman M.E., Ivans L.J., Cheng Y., Lim J., Zhao Y., Ballare C.L., Sandberg G., Noel J.P., Chory J.
Cell 133:164-176(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC015446 Genomic DNA. Translation: AAG12533.1.
AC079286 Genomic DNA. Translation: AAG12844.1.
CP002684 Genomic DNA. Translation: AEE31660.1.
PIRC86464.
RefSeqNP_174666.1. NM_103126.1.
UniGeneAt.51925.

3D structure databases

ProteinModelPortalQ9FE98.
SMRQ9FE98. Positions 33-447.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PaxDbQ9FE98.
PRIDEQ9FE98.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT1G34040.1; AT1G34040.1; AT1G34040.
GeneID840301.
KEGGath:AT1G34040.

Organism-specific databases

TAIRAT1G34040.

Phylogenomic databases

eggNOGNOG290378.
HOGENOMHOG000237549.
InParanoidQ9FE98.
OMAMFLEPFW.
PhylomeDBQ9FE98.

Enzyme and pathway databases

BioCycARA:AT1G34040-MONOMER.

Gene expression databases

GenevestigatorQ9FE98.

Family and domain databases

Gene3D2.10.25.30. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR006948. Alliinase_C.
IPR006947. EGF_alliinase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF04864. Alliinase_C. 1 hit.
PF04863. EGF_alliinase. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameTAR3_ARATH
AccessionPrimary (citable) accession number: Q9FE98
Entry history
Integrated into UniProtKB/Swiss-Prot: July 27, 2011
Last sequence update: March 1, 2001
Last modified: May 14, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Arabidopsis thaliana

Arabidopsis thaliana: entries and gene names