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Unreviewed, UniProtKB/TrEMBL Q9FCX5 (Q9FCX5_CLODI)

Last modified April 14, 2009. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Toxin A EMBL CAC03681.1
Gene names
Name: tcdA EMBL CAC03681.1
OrganismClostridium difficile EMBL CAC03681.1
Taxonomic identifier1496 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeClostridium

Protein attributes

Sequence length553 AA.
Sequence statusFragment.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5531 EMBL CAC03681.1

Sequences

Sequence LengthMass (Da)Tools
Q9FCX5-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: DDE4551A6D8C3B25

FASTA55363,913
        10         20         30         40         50         60 
MSSISKKELI KLAYSVRPRE NEYKTILTNL DEYNKLTTNN NENKYLQLKK LNESIDVFMN 

        70         80         90        100        110        120 
KYKNSSRNRA LSNLKKDILK EVILIKNSNT SPVEKNLHFV WIGGEVSDIA LEYIKQWADI 

       130        140        150        160        170        180 
NAEYNVKLWY DSEAFLVNTL KKAIVESSTT EALQLLEEEI QNPQFDMKFY KKRMEFIYDR 

       190        200        210        220        230        240 
QKRFINYYKS QINKPTVPTI DDIIKSHLVS EYNRDETLLE SYRTNSLRKI NSNHGIDIRA 

       250        260        270        280        290        300 
NSLFTEQELL NIYSQELLNR GNLAAASDIV RLLALKNFGG VYLDVDMLPG IHSDLFKTIP 

       310        320        330        340        350        360 
RPSSIGLDRW EMIKLEAIMK YKKYINNYTS ENFDKLDQQL KDNFKLIIES KSEKSEIFSK 

       370        380        390        400        410        420 
LENLNVSDLE IKIAFALGSV INQALISKQG SYLTNLVIEQ VKNRYQFLNQ HLNPAIESDN 

       430        440        450        460        470        480 
NFTDTTKIFH DSLFNSATAE NSMFLTKIAP YLQVGFMPEA RSTISLSGPG AYASAYYDFI 

       490        500        510        520        530        540 
NLQENTIEKT LKASDLIEFK FPENNLSQLT EQEINSLWSF DQASAKYQIE RYVRDYTGGS 

       550 
PSGDNGVDFN KNT 

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References

[1]"A chimeric ribozyme in clostridium difficile combines features of group I introns and insertion elements."
Braun V., Mehlig M., Moos M., Rupnik M., Kalt B., Mahony D.E., von Eichel-Streiber C.
Mol. Microbiol. 36:1447-1459(2000) [PubMed: 10931294] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C34 EMBL CAC03681.1.

Cross-references

Sequence databases

AJ131844 Genomic DNA. Translation: CAC03681.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT44. Glycosyltransferase Family 44.

Family and domain databases

InterProIPR007577. Glyco_trans_s_bd.
[Graphical view]
PfamPF04488. Gly_transf_sug. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9FCX5_CLODI
AccessionPrimary (citable) accession number: Q9FCX5
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: April 14, 2009
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information