Unreviewed, UniProtKB/TrEMBL Q9F8Q9 (Q9F8Q9_9BACL)

Names and origin

Protein names

Submitted name:
    XalA EMBL AAG24953.1

Gene names

Name:

xalA EMBL AAG24953.1

Organism

Paenibacillus alginolyticus EMBL AAG24953.1

Taxonomic identifier

59839 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Paenibacillaceae › Paenibacillus

Protein attributes

Sequence length	936 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology.

Ontologies

Keywords
Domain	Signal
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro carbon-oxygen lyase activity, acting on polysaccharides Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 36	36	Potential EMBL AAG24953.1
	Chain	37 – 936	900	Potential EMBL AAG24953.1		PRO_5000058107

Sequences

	Sequence		Length	Mass (Da)
	Q9F8Q9-1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 25581CA3BE15635A	FASTA	936	100,824
	10 20 30 40 50 60 MSLSRSLARR NYVQVIVASL LSLVLLLSWL PTPANASDEY DTLRLKWRDM LIGGSSVSTS 70 80 90 100 110 120 DPDVVTAITT LTAEAQTNWT NLNKTPGGTT NYLWVDLRSS SDSSQLTTAY NRIKSMALAS 130 140 150 160 170 180 QTPGSTLYGN TDLIADTIMA LDWMDTWKYY ATKTSYQNWW DWQIGVPLAL NDTVVLMYDL 190 200 210 220 230 240 LSSTQIANYM AAVDRFAPTV DKTGANRVWK ATAVGIRAVI VKDSVKLAAA RDGLTSVFPN 250 260 270 280 290 300 VTSGDGFYND GSFIQHNYFG YTGGYGASIL MDLANLMYLL SGSTWAVTAP EQSNLYQWIY 310 320 330 340 350 360 NAYQPLLYKG AMMDMVRGRE ISRYYAQDRN TGHLIMQGII RVSQFAPATD AAAYKAMIKS 370 380 390 400 410 420 WISSENSIGT GVKFYGDASV NMITLAKAIM ANASITAAPE LVKYQQFAAM DRAVFLRPGF 430 440 450 460 470 480 GLGIGMFSTR TQNYESINSE NAKGWYSGAG TTYLYNNDLD QYSDNYWPTV DNYRLPGTTV 490 500 510 520 530 540 ISQTSTTAQF GTNNWVGGTD LLGIYGTTGM AQGVASNALT AKKSWFTFDD EIVALGAGIS 550 560 570 580 590 600 STDNATIESI VENRKLNSAG TNALTVNGTA QSTALGWTQS LTNVNTIHMA GNVAGSDIGY 610 620 630 640 650 660 YFPTAPTIQA KREARTGNWK QINSRASTPS TPYTRNYLTM WFDHGVNPTN ASYQYVILPN 670 680 690 700 710 720 KTSAQVSSYA SNPNISVLEN SNAAQAVKEN TLNVVGVNFW NDAVKTVGGI TSNKKASVMT 730 740 750 760 770 780 KETASDLSVS VSDPTQANTG SIQIEINKAA TGIISTDTGV TVTQLSPTIK FTVNVGASKG 790 800 810 820 830 840 KSFKAKFDFT GTVTPPTPPA GTTVIVDNAG SGVTKVGSWT TASTATDKYL TNYVHDSNTG 850 860 870 880 890 900 QGTKSVTLTP TLTGAGNYNV YMWWPAHANR ATNIPVDIGY DGGSTTVTIN QQLNGGQWNL 910 920 930 IGTFPFAAGS GGYVKVRNDG ANGYVTVDAV KFDPVP

References

[1]	"A pyruvated mannose-specific xanthan lyase involved in xanthan degradation by Paenibacillus alginolyticus XL-1." Ruijssenaars H.J., de Bont J.A., Hartmans S. Appl. Environ. Microbiol. 65:2446-2452(1999) [PubMed: 10347025] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: XL-1 EMBL AAG24953.1.
[2]	"A novel gene encoding xanthan lyase of Paenibacillus alginolyticus strain XL-1." Ruijssenaars H.J., Hartmans S., Verdoes J.C. Appl. Environ. Microbiol. 66:3945-3950(2000) [PubMed: 10966413] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: XL-1 EMBL AAG24953.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF242413 Genomic DNA. Translation: AAG24953.1.
3D structure databases
HSSP	HSSP built from PDB template 1J0M based on UniProtKB Q9AQS0.
ModBase	Search...
Protein family/group databases
CAZy	PL8. Polysaccharide Lyase Family 8.
Family and domain databases
InterPro	IPR014718. Glyco_hydro-type_carb-bd_sub. IPR012970. Lyase_8_alpha_N. IPR004103. Lyase_8_C. IPR003159. Lyase_8_central. IPR012329. Lyase_8_N. [Graphical view]
Gene3D	G3DSA:2.70.98.10. Glyco_hydro_42_D5. 1 hit. G3DSA:2.60.220.10. Lyase_8_C. 1 hit. G3DSA:1.50.10.100. Lyase_8_N. 1 hit.
Pfam	PF02278. Lyase_8. 1 hit. PF02884. Lyase_8_C. 1 hit. PF08124. Lyase_8_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9F8Q9_9BACL

Accession

Primary (citable) accession number: Q9F8Q9

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	April 14, 2009
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)