Q9F7L3 (Q9F7L3_9GAMM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate lyase EMBL AAG29353.1

Gene names

Name:

Pel10A EMBL AAG29353.1

Organism

Cellvibrio japonicus EMBL AAG29353.1

Taxonomic identifier

155077 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Cellvibrio

Protein attributes

Sequence length	649 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Lyase EMBL AAG29353.1
Technical term	3D-structure PDB 1GXN PDB 1GXO PDB 1GXM
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW polysaccharide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9F7L3 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: F9F1E7D3B744DF43	FASTA	649	68,524
	10 20 30 40 50 60 MRTLHFLPVS RFFMTSLLAV TAISQVAPAW AACSYKVTNN WGSGFTAEIN VTNDTGQAVS 70 80 90 100 110 120 NWSVSWQESG ATVTNAWNAT LSGSNPYTAA SLGWNGTLAP GASASFGFQA NGSAGAPGVN 130 140 150 160 170 180 GTLCGTATSS VSSVSSTPVS SSSSVRSSSS SSSVQSSQAL STLTLQEVQA GFCRVDGIAN 190 200 210 220 230 240 ESTNGGFTGT GYANTDNALG AAIVWAVAAS TSSRYKLTVR FANGGSASRD GSLLINGGSN 250 260 270 280 290 300 GNYTLSLPAT GAWTTWQTVT VEVDLVQGNN LVQLTSRTAD GLANIDYLRV EGASTTAGSC 310 320 330 340 350 360 SGNTGSSVSS VRSSSSVASS SSSSQATGRM LTLDGNPAAN WLNNARTKWS ASRADVVLSY 370 380 390 400 410 420 QQNNGGWPKN LDYNSVGNGG GGNESGTIDN GATITEMVFL AEVYKSGGNT KYRDAVRKAA 430 440 450 460 470 480 NFLVNSQYST GALPQFYPLK GGYSDHATFN DNGMAYALTV LDFAANKRAP FDTDVFSDSD 490 500 510 520 530 540 RTRFKTAVTK GTDYILKAQW KQNGVLTVWC AQHGALDYQP KKARAYELES LSGSESVGVL 550 560 570 580 590 600 AFLMTQPQTA EIERAVRAGV AWFNSPRTYL EGYTYDSSLA ATNPIVPRAG SKMWYRFYDL 610 620 630 640 NTNRGFFSDR DGSKFYDITQ MSLERRTGYS WGGNYGTSII NFAQKVGYL

References

[1]	"Pectate lyase 10A from Pseudomonas cellulosa is a modular enzyme containing a family 2a carbohydrate-binding module." Brown I.E., Mallen M.H., Charnock S.J., Davies G.J., Black G.W. Biochem. J. 355:155-165(2001) [PubMed: 11256960] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[2]	"Convergent evolution sheds light on the anti-beta -elimination mechanism common to family 1 and 10 polysaccharide lyases." Charnock S.J., Brown I.E., Turkenburg J.P., Black G.W., Davies G.J. Proc. Natl. Acad. Sci. U.S.A. 99:12067-12072(2002) [PubMed: 12221284] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.32 ANGSTROMS) OF 327-649.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF279264 Genomic DNA. Translation: AAG29353.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1GXM	X-ray	1.32	A/B	327-649	[»]
1GXN	X-ray	1.50	A	327-649	[»]
1GXO	X-ray	2.05	A	327-649	[»]

ProteinModelPortal

Q9F7L3.

SMR

Q9F7L3. Positions 324-649.

ModBase

Search...

Protein family/group databases

CAZy

CBM2. Carbohydrate-Binding Module Family 2.
CBM35. Carbohydrate-Binding Module Family 35.
PL10. Polysaccharide Lyase Family 10.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR018366. CBM2_CS.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR012669. Pectate_lyase.
[Graphical view]

Gene3D

G3DSA:2.60.40.290. CBD_carb_bd. 1 hit.

Pfam

PF00553. CBM_2. 1 hit.
PF03422. CBM_6. 1 hit.
PF09492. Pec_lyase. 1 hit.
[Graphical view]

SMART

SM00637. CBD_II. 1 hit.
[Graphical view]

SUPFAM

SSF49384. Cellul_bind. 1 hit.
SSF49785. Gal_bind_like. 1 hit.

TIGRFAMs

TIGR02474. Pec_lyase. 1 hit.

PROSITE

PS51173. CBM2. 1 hit.
PS00561. CBM2_A. 1 hit.
PS51175. CBM6. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q9F7L3_9GAMM

Accession

Primary (citable) accession number: Q9F7L3

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)