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Q9F561

- Q9F561_ECOLX

UniProt

Q9F561 - Q9F561_ECOLX

Protein
Submitted name:

YcfA protein

Gene

ycfA

Organism
Escherichia coli
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. hydrolase activity, acting on ester bonds Source: InterPro
    2. mRNA binding Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    YcfA proteinImported
    Gene namesi
    Name:ycfAImported
    ORF Names:M55_030Imported
    Encoded oniPlasmid R721Imported
    Plasmid pHN1122-1Imported
    OrganismiEscherichia coliImported
    Taxonomic identifieri562 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

    Structurei

    3D structure databases

    ProteinModelPortaliQ9F561.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Family and domain databases

    InterProiIPR012933. HicA_mRNA_interferase.
    IPR015146. RNR_stirrup.
    [Graphical view]
    PfamiPF07927. YcfA. 1 hit.
    [Graphical view]
    SUPFAMiSSF54786. SSF54786. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q9F561-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKSADLLKEL IAAGCELKRH KASSHQIWWS PITGKTFPVP HPKKDLPLGT   50
    VRSIKKMAGI 60
    Length:60
    Mass (Da):6,648
    Last modified:March 1, 2001 - v1
    Checksum:i445459A1D52E371C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JN797501 Genomic DNA. Translation: AFB76440.1.
    AP002527 Genomic DNA. Translation: BAB12616.1.
    RefSeqiNP_065323.1. NC_002525.1.
    YP_007443186.1. NC_020270.1.

    Genome annotation databases

    GeneIDi1238747.
    14568870.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    JN797501 Genomic DNA. Translation: AFB76440.1 .
    AP002527 Genomic DNA. Translation: BAB12616.1 .
    RefSeqi NP_065323.1. NC_002525.1.
    YP_007443186.1. NC_020270.1.

    3D structure databases

    ProteinModelPortali Q9F561.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 1238747.
    14568870.

    Family and domain databases

    InterProi IPR012933. HicA_mRNA_interferase.
    IPR015146. RNR_stirrup.
    [Graphical view ]
    Pfami PF07927. YcfA. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54786. SSF54786. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequence of the R721 shufflon."
      Kim S., Komano T.
      J. Bacteriol. 174:7053-7058(1992) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: K-12Imported.
      Plasmid: R721
    2. "Organization and diversification of plasmid genomes: complete nucleotide sequence of the R721 genome."
      Sampei G., Motomura K., Masuda S., Yamaguchi T., Ando K., Oishi T., Furuya N., Komano T., Mizobuchi K.
      Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: K-12Imported.
      Plasmid: R721
    3. Liu J.-H., He L., He D.
      Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 1122Imported.
      Plasmid: pHN1122-1
    4. "Genetic Characterization of IncI2 Plasmids Carrying blaCTX-M-55 Spreading in both Pets and Food Animals in China."
      Lv L., Partridge S.R., He L., Zeng Z., He D., Ye J., Liu J.H.
      Antimicrob. Agents Chemother. 57:2824-2827(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 1122Imported.
      Plasmid: pHN1122-1

    Entry informationi

    Entry nameiQ9F561_ECOLX
    AccessioniPrimary (citable) accession number: Q9F561
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2001
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 37 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    PlasmidImported

    External Data

    Dasty 3