Q9F561 (Q9F561_ECOLX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
YcfA protein EMBL BAB12616.1

Gene names

Name:	ycfA EMBL BAB12616.1
ORF Names:	M55_030 EMBL AFB76440.1

Encoded on

Plasmid R721 Ref.1 Ref.2 EMBL BAB12616.1
Plasmid pHN1122-1 Ref.3 EMBL AFB76440.1

Organism

Escherichia coli EMBL BAB12616.1

Taxonomic identifier

562 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia

Protein attributes

Sequence length	60 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Plasmid EMBL BAB12616.1
Gene Ontology (GO)
Molecular_function	hydrolase activity, acting on ester bonds Inferred from electronic annotation. Source: InterPro mRNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9F561 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 445459A1D52E371C	FASTA	60	6,648
	10 20 30 40 50 60 MKSADLLKEL IAAGCELKRH KASSHQIWWS PITGKTFPVP HPKKDLPLGT VRSIKKMAGI

References

[1]	"Nucleotide sequence of the R721 shufflon." Kim S., Komano T. J. Bacteriol. 174:7053-7058(1992) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: K-12 EMBL BAB12616.1.
[2]	"Organization and diversification of plasmid genomes: complete nucleotide sequence of the R721 genome." Sampei G., Motomura K., Masuda S., Yamaguchi T., Ando K., Oishi T., Furuya N., Komano T., Mizobuchi K. Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: K-12 EMBL BAB12616.1.
[3]	Liu J.-H., He L., He D. Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: 1122 EMBL AFB76440.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	JN797501 Genomic DNA. Translation: AFB76440.1. AP002527 Genomic DNA. Translation: BAB12616.1.
RefSeq	NP_065323.1. NC_002525.1. YP_007443186.1. NC_020270.1.
3D structure databases
ProteinModelPortal	Q9F561.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1238747. 14568870.
Phylogenomic databases
ProtClustDB	CLSK862098.
Family and domain databases
InterPro	IPR012933. HicA_mRNA_interferase. IPR015146. RNR_stirrup. [Graphical view]
Pfam	PF07927. YcfA. 1 hit. [Graphical view]
SUPFAM	SSF54786. rNuc_Rdtase_stirrup. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q9F561_ECOLX

Accession

Primary (citable) accession number: Q9F561

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)