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Q9F561 (Q9F561_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:ycfA EMBL BAB12616.1
ORF Names:M55_030 EMBL AFB76440.1
Encoded onPlasmid R721 Ref.1 Ref.2 EMBL BAB12616.1
Plasmid pHN1122-1 Ref.3 Ref.4 EMBL AFB76440.1
OrganismEscherichia coli EMBL BAB12616.1
Taxonomic identifier562 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length60 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
Q9F561 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 445459A1D52E371C

FASTA606,648
        10         20         30         40         50         60 
MKSADLLKEL IAAGCELKRH KASSHQIWWS PITGKTFPVP HPKKDLPLGT VRSIKKMAGI 

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References

[1]"Nucleotide sequence of the R721 shufflon."
Kim S., Komano T.
J. Bacteriol. 174:7053-7058(1992) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: K-12 EMBL BAB12616.1.
[2]"Organization and diversification of plasmid genomes: complete nucleotide sequence of the R721 genome."
Sampei G., Motomura K., Masuda S., Yamaguchi T., Ando K., Oishi T., Furuya N., Komano T., Mizobuchi K.
Submitted (JUN-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: K-12 EMBL BAB12616.1.
[3]Liu J.-H., He L., He D.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 1122 EMBL AFB76440.1.
[4]"Genetic Characterization of IncI2 Plasmids Carrying blaCTX-M-55 Spreading in both Pets and Food Animals in China."
Lv L., Partridge S.R., He L., Zeng Z., He D., Ye J., Liu J.H.
Antimicrob. Agents Chemother. 57:2824-2827(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 1122 EMBL AFB76440.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
JN797501 Genomic DNA. Translation: AFB76440.1.
AP002527 Genomic DNA. Translation: BAB12616.1.
RefSeqNP_065323.1. NC_002525.1.
YP_007443186.1. NC_020270.1.

3D structure databases

ProteinModelPortalQ9F561.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID1238747.
14568870.

Phylogenomic databases

ProtClustDBCLSK862098.

Family and domain databases

InterProIPR012933. HicA_mRNA_interferase.
IPR015146. RNR_stirrup.
[Graphical view]
PfamPF07927. YcfA. 1 hit.
[Graphical view]
SUPFAMSSF54786. SSF54786. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9F561_ECOLX
AccessionPrimary (citable) accession number: Q9F561
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: April 16, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)