Q9F4L1 (Q9F4L1_FIBSS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate binding family 6 EMBL ACX75383.1

Submitted name:
Carbohydrate-binding protein, CBM6 family EMBL ADL25196.1
Submitted name:
Cellulase Cel5K EMBL AAG02559.1

Gene names

Ordered Locus Names:

Fisuc_1790, FSU_2290

Organism

Fibrobacter succinogenes (strain ATCC 19169 / S85) [Complete proteome] [HAMAP] EMBL AAG02559.1

Taxonomic identifier

59374 [NCBI]

Taxonomic lineage

Bacteria › Fibrobacteres › Fibrobacterales › Fibrobacteraceae › Fibrobacter

Protein attributes

Sequence length	552 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9F4L1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: C3C868F4521BDF8E	FASTA	552	61,728
	10 20 30 40 50 60 MKKRVLGLAF LLCANSFAVT SQFRGVNWAD KRDNFVSDVL VLSGLSLSDN HESAYAIADR 70 80 90 100 110 120 IVGQFQEVLG TNSVRMPVNE PTILKAFDMY SGALDAALEH GRVAMGYWGP AQPAGPKNMD 130 140 150 160 170 180 DWWKMWAKLV ETYGDHPNAY FEIFNEPHMY NKTDLRNLYA DWLKKFPNVP RDHILLDGSG 190 200 210 220 230 240 LAWNVPDIAD DPRFEGCLFA VHEYTFWNMS ITTEQGWKNS FKGKVGKYID RTVCTEWGGA 250 260 270 280 290 300 MSPGDKAGVH YDYQDYNKAP TNYFTAYIRG MSDQLREWEM GSFYWPGLRD GDWYSMTKRS 310 320 330 340 350 360 GEGVNTKLQI VNQSGVDRMQ MAWADTVETT PPQQDPFGGF DADGKPVAGK AITIPGTLEA 370 380 390 400 410 420 ENYDLGGSRV SFYDKSSTNE GGAYRKDAVD IVVLDSADLS KGYALGYTQD GEWLEYTVNV 430 440 450 460 470 480 AKTAKFTVEV QMATASEKAG VQLFIDNKAV SDGIIAKQGE DWSTYTAVQS QLGEIAAGEH 490 500 510 520 530 540 VLKMQIVGNY VNIDNIRFCE GEKCEETVGI RANRASSVRT LENSSPRLRV QNNKLFVEKN 550 GLRFDLTGHR IK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete sequence of Fibrobacter succinogenes subsp. succinogenes S85." Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Weimer P.J. , Stevenson D.M., Boyum J., Brumm P.I., Mead D. Submitted (OCT-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19169 / S85.
[2]	Durkin A.S., Nelson K.E., Morrison M., Forsberg C.W., Wilson D.B., Russell J.B., Cann I.K.O., Mackie R.I., White B.A. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: S85.
[3]	"Complete sequence of Fibrobacter succinogenes subsp. succinogenes S85." Durkin A.S., Nelson K.E., Morrison M., Forsberg C.W., Wilson D.B., Russell J.B., Cann I.K.O., Mackie R.I., White B.A. Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 19169 / S85.
[4]	"Cloning and sequencing of a 6.7 kb fragment of Fibrobacter succinogenes S-85 DNA encoding four open reading frames homologous to glycosyl hydrolases and showing xylanase activity on RBB xylan plates." Shaw N.D., Irwin D.C., Wilson D.B. Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY007248 Genomic DNA. Translation: AAG02559.1. CP001792 Genomic DNA. Translation: ACX75383.1. CP002158 Genomic DNA. Translation: ADL25196.1.
RefSeq	YP_003249865.1. NC_013410.1.
3D structure databases
ProteinModelPortal	Q9F4L1.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9F4L1.
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8522402.
GenomeReviews	Gene locus Fisuc_1790 in contig CP001792_GR. Gene locus FSU_2290 in contig CP002158_GR.
KEGG	fsu:Fisuc_1790.
PATRIC	32143341. VBIFibSuc28982_1751.
Organism-specific databases
CMR	Search...
Family and domain databases
InterPro	IPR006584. Cellulose-bd_IV. IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR001547. Glyco_hydro_5. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF03422. CBM_6. 1 hit. PF00150. Cellulase. 1 hit. [Graphical view]
SMART	SM00606. CBD_IV. 1 hit. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS51175. CBM6. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9F4L1_FIBSS

Accession

Primary (citable) accession number: Q9F4L1

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)