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Unreviewed, UniProtKB/TrEMBL Q9F284 (Q9F284_9FLAO)

Last modified April 14, 2009. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

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Names and origin

Protein namesSubmitted name:
    Iota-carrageenase CgiA EMBL CAC07822.1
Gene names
Name: cgiA EMBL CAC07822.1
OrganismZobellia galactanivorans EMBL CAC07822.1
Taxonomic identifier63186 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Flavobacteria › Flavobacteriales › Flavobacteriaceae › Zobellia

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Protein attributes

Sequence length491 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology.

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Ontologies

Keywords
   DomainSignal
Gene Ontology (GO)
None. [Check GOA]

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 1919 Potential EMBL CAC07822.1
Chain20 – 491472iota-carrageenase EMBL CAC07822.1
PRO_5000065975

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Sequences

Sequence LengthMass (Da)Tools
Q9F284-1 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: AE310457609FC77C

FASTA49153,395
        10         20         30         40         50         60 
MKLQFKPVYL ASIAIMAIGC TKEVTENDTS EISEVPTELR AAASSFYTPP GQNVRANKKN 

        70         80         90        100        110        120 
LVTDYGVNHN DQNDDSSKLN LAIKDLSDTG GILTLPKGKY YLTKIRMRSN VHLEIEKGTV 

       130        140        150        160        170        180 
IYPTKGLTPA KNHRIFDFAS KTEEKIENAS IVGKGGKFIV DLRGNSSKNQ IVADVGNVTN 

       190        200        210        220        230        240 
FKISNFTIKD EKTIFASILV SFTDKAGNAW PHKGIIENID QANAHTGYGL IQAYAADNIL 

       250        260        270        280        290        300 
FNNLSCTGGV TLRLETDNLA MKTAKKGGVR DIFATKIKNT NGLTPVMFSP HFMENGKVTI 

       310        320        330        340        350        360 
DDVTAIGCAY AVRVEHGFIE IFDKGNRASA DAFKNYIEGI LGAGSVEVVY KRNNGRTWAA 

       370        380        390        400        410        420 
RIANDFNEAA YNHSNPAVSG IKPGKFATSK VTNVKATYKG TGAKLKQAFL SYLPCSERSK 

       430        440        450        460        470        480 
VCRPGPDGFE YNGPSLGVTI DNTKRDNSLG NYNVNVSTSS VQGFPNNYVL NVKYNTPKVC 

       490 
NQNLGSITSC N

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References

[1]"iota-Carrageenases constitute a novel family of glycoside hydrolases, unrelated to that of kappa-carrageenases."
Barbeyron T., Michel G., Potin P., Henrissat B., Kloareg B.
J. Biol. Chem. 275:35499-35505(2000) [PubMed: 10934194] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Dsij EMBL CAC07822.1.

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Cross-references

Sequence databases

AJ272071 Genomic DNA. Translation: CAC07822.1.

3D structure databases

HSSPHSSP built from PDB template 1H80 based on UniProtKB Q9F5I8.
ModBaseSearch...

Protein family/group databases

CAZyGH82. Glycoside Hydrolase Family 82.

Family and domain databases

InterProIPR012334. Pectin_lyas_fold.
[Graphical view]
Gene3DG3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
ProtoNetSearch...

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Entry information

Entry nameQ9F284_9FLAO
AccessionPrimary (citable) accession number: Q9F284
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: April 14, 2009
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information