Unreviewed, UniProtKB/TrEMBL Q9F1V3 (Q9F1V3_CLOJO)

Names and origin

Protein names

Submitted name:
    Xylanase A EMBL BAB20931.1

Gene names

Name:

xynA EMBL BAB20931.1

Organism

Clostridium josui EMBL BAB20931.1

Taxonomic identifier

1499 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	1050 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 10 (cellulase F) family. RuleBase RU003432V0

Ontologies

Keywords
Biological process	Xylan degradation
Molecular function	Glycosidase RuleBase RU003432V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9F1V3-1 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 775E95DB7808E91D	FASTA	1,050	115,708
	10 20 30 40 50 60 MYRNRNKVLA LLLVFAMLIS VMPISTVMAD TKTTYHETFA DGKGIATQSG GANLEKVGNK 70 80 90 100 110 120 VFEGNDDGAA LYVSNRINNW DAADFKFEDI GLKDGKTYNI TVKGFVDSNA KVPAGAQAFL 130 140 150 160 170 180 QVADSYAWLA GAEFVAGKAF TLSGKYTVDT SKDSRVRVQS NDEGKEVPFY IGDILITEEA 190 200 210 220 230 240 TEEVPVDPNQ PKAETFKTIT FEDNTTEGFE PRGGEGSEKL TVTKEANHTA NGSYALKVEN 250 260 270 280 290 300 RTMTWHGPSL HVEKNVSQGS EYKVTAWVKL ISPESTQLQL STQVGNGGSA SYVSLAAKTI 310 320 330 340 350 360 STADGWVKFE GTYRYNNVSS GYITIYVESA SSANASFYID DISFEQTGSG PIKIQDDLKS 370 380 390 400 410 420 IKDVYKKDFL IGNAIAAEDM EGVRLDLLKK HFNVMTAGNA MKPDALQPSK GNFTFEDADK 430 440 450 460 470 480 LVDKVLAEGF KMHGHTLVWH QQSPAWLNTK VDASGNAIPL SREEALTNLR THIKTVVEHY 490 500 510 520 530 540 GNKVISWDVV NEGMNDNPTN PADWKASLRQ SPWYQAIGPD YIEEAFLAAR EVLDAHPDWD 550 560 570 580 590 600 VKLYYNDYND DNQSKSKAIY YMVKELNEKY AKTHPGKLLI DGVGMQAHYS LSTNPTNVEL 610 620 630 640 650 660 SLERFISLGV EVSITELDVQ AGSDFKLTDE IAEAQGYLYA QLFDIYKKHA ANISRVTIWG 670 680 690 700 710 720 LDDGTSWRSS TNPLPFDKNL QAKLAFFGLI DPAKYMDEHK PQTPKDAKHT TAKYGTPVID 730 740 750 760 770 780 GTIDSVWSKA HAIPVNTYQM AWQGATGTAK ALWDDKNLYV LVQVSDSELD KKSANAYEQD 790 800 810 820 830 840 SVEVFFDENN GKTSFYQDDD GQYRVNFDNE TSFNPASIAE GFESATKVSG TSYIVEMKIP 850 860 870 880 890 900 FKTLTPSDNM KVGFDVQVND GKDGSRKSVA TWNDTKGTGY QDTSVYGVLT LTKSDSNSTS 910 920 930 940 950 960 EYITRGQFID SIIKALGLNK NVQAKDSFKD VKKDSSYYAS VSAAYQKGII SGYKNGEFKP 970 980 990 1000 1010 1020 QAKITRQEAM TIIAKAIKVT GKNVNYSTAE INKILKEFKD SNKVANWAKA SVAACIKEGI 1030 1040 1050 ISGKSGKMIA PQENITVSQT ESIVKKLSAK

References

[1]

"Cloning, sequencing, and expression of the gene encoding a cell-bound multi-domain xylanase from Clostridium josui, and characterization of the translated product." Feng J.X., Karita S., Fujino E., Fujino T., Kimura T., Sakka K., Ohmiya K. Biosci. Biotechnol. Biochem. 64:2614-2624(2000) [PubMed: 11210125] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: FERM P-9684 EMBL BAB20931.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB041993 Genomic DNA. Translation: BAB20931.1.
PIR	JC7578.
3D structure databases
HSSP	HSSP built from PDB template 1I8A based on UniProtKB Q60037.
ModBase	Search...
Protein family/group databases
CAZy	CBM22. Carbohydrate-Binding Module Family 22. CBM9. Carbohydrate-Binding Module Family 9. GH10. Glycoside Hydrolase Family 10.
Family and domain databases
InterPro	IPR000276. 7TM_GPCR_Rhodpsn. IPR010502. Carb-bd_9. IPR015922. Carb-bd_9-like. IPR003305. CenC_carb_bd. IPR001000. Glyco_hydro_10. IPR013781. Glyco_hydro_sg_catalytic. IPR001119. SLH. [Graphical view]
Gene3D	G3DSA:2.60.40.1190. CBD9. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
Pfam	PF02018. CBM_4_9. 2 hits. PF06452. DUF1083. 1 hit. PF00331. Glyco_hydro_10. 1 hit. PF00395. SLH. 2 hits. [Graphical view]
PRINTS	PR00134. GLHYDRLASE10.
SMART	SM00633. Glyco_10. 1 hit. [Graphical view]
PROSITE	PS00237. G_PROTEIN_RECEP_F1_1. 1 hit. Uncertain. PS00591. GLYCOSYL_HYDROL_F10. 1 hit. PS51272. SLH. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q9F1V3_CLOJO

Accession

Primary (citable) accession number: Q9F1V3

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	June 16, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)