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Q9ESX7 (Q9ESX7_CAVPO) Unreviewed, UniProtKB/TrEMBL

Last modified October 19, 2011. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
TRPC6 cation channel, putative alternative splice variant gpTRPC6c EMBL CAC06427.1
Gene names
Name:trp6 EMBL CAC06427.1
OrganismCavia porcellus (Guinea pig) EMBL CAC06427.1
Taxonomic identifier10141 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Hystricognathi › Caviidae › Cavia

Protein attributes

Sequence length815 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Biological processIon transport
Transport
   Cellular componentMembrane
   DomainANK repeat RuleBase RU003321 SAAS SAAS005821
Repeat RuleBase RU003536
Transmembrane RuleBase RU003378
   Molecular functionIonic channel RuleBase RU003378
Gene Ontology (GO)
   Cellular componentintegral to membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functioncalcium channel activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL CAC06427.1

Sequences

Sequence LengthMass (Da)Tools
Q9ESX7 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 3E20E2720DBDEB83

FASTA81593,387
        10         20         30         40         50         60 
MDDGCPQLPL PPHGYYPSLR GTDNRLTHRR QTVLREKGRR LANRGPAYMF NDHSTTLSIE 

        70         80         90        100        110        120 
EERFLDAAEY GNIPVVRKML EECLSLNVNC VDYMGQNALQ LAVANEHLEI TELLLKKENL 

       130        140        150        160        170        180 
SRVGDALLLA ISKGYVRIVE AILSHPAFAE GKRLATSPSQ SELQQDDFYA YDEDGTRFSH 

       190        200        210        220        230        240 
DVTPIILAAH CQEYEIVHTL LRKGARIERP HDYFCECSEC NQKQKHDSFS HSRSRINAYK 

       250        260        270        280        290        300 
GLASPAYLSL SSEDPVMTAL ELSNELAVLA NIEKEFKNDY KKLSMQCKDF VVGLLDLCRN 

       310        320        330        340        350        360 
TEEVEAILNG DVETCQPGDQ GRPNLSRLKL AIKYEVKKFV AHPNCQQQLL SIWYENLSGL 

       370        380        390        400        410        420 
RQQTMAVKFL VVLGVAIGLP FLALIYWCAP CSKMGKIMRG PFMKFVAHAA SFTIFLGLLV 

       430        440        450        460        470        480 
MNAADRFEGT KLRPNETSTD NAKQLFRMKT SCFSWMEMLI ISWVIARIKW DPSDPQIISE 

       490        500        510        520        530        540 
GLYAIAVVLS FSRIAYILPA NESFGPLQIS LGRTVKDIFK FMVIFIMVFV AFMIGMFHLY 

       550        560        570        580        590        600 
SYYIGAKQNE AFTTVEESFK TLFWAIFGLS EVKSVVINYN HKFIENIGYV LYGVYNVTMV 

       610        620        630        640        650        660 
IVLLNMLIAM INSSFQEIED DADVEWKFAR AKLWFSYFEE GRTLPVPFNL VPSPKSLLYL 

       670        680        690        700        710        720 
LLKFKKWGFE LFQGHKKAFQ EDAEMNKRNE EKKFGILGSH EDLSKLSVDK KQLGQNKQSS 

       730        740        750        760        770        780 
IRSSEDFHLN SFNNPPRQYQ KIMKRLIKRY VLQAQIDKES DEVNEGELKE IKQDISSLRY 

       790        800        810 
ELLEEKSQNT EDLAELIRKL GEKLSSEPKQ EEINR

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References

[1]Fenech C.J.
Thesis (2000), Dpt. Pharmacology & Clinical Pharmacology, St George's Hospital, University of London, UNITED KINGDOM.
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Small intestine EMBL CAC06427.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ293896 mRNA. Translation: CAC06427.1.

3D structure databases

ProteinModelPortalQ9ESX7.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ9ESX7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSCPOT00000026943; ENSCPOP00000019785; ENSCPOG00000005560.

Phylogenomic databases

GeneTreeENSGT00550000074237.
HOVERGENHBG068337.

Family and domain databases

InterProIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
IPR005821. Ion_trans.
IPR013555. TRP_2.
IPR005462. TRPC6_channel.
IPR002153. TRPC_channel.
[Graphical view]
Gene3DG3DSA:1.25.40.20. ANK. 1 hit.
PfamPF12796. Ank_2. 1 hit.
PF00520. Ion_trans. 1 hit.
PF08344. TRP_2. 1 hit.
[Graphical view]
PRINTSPR01097. TRNSRECEPTRP.
PR01647. TRPCHANNEL6.
SMARTSM00248. ANK. 3 hits.
[Graphical view]
SUPFAMSSF48403. ANK. 1 hit.
PROSITEPS50297. ANK_REP_REGION. 2 hits.
PS50088. ANK_REPEAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9ESX7_CAVPO
AccessionPrimary (citable) accession number: Q9ESX7
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: October 19, 2011
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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