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Q9ESW2 (Q9ESW2_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:Il1a RGD 2890
Synonyms:IL-1 alpha EMBL CAC03996.1
OrganismRattus norvegicus (Rat) EMBL CAC03996.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the IL-1 family. RuleBase RU003752

Ontologies

Keywords
   Cellular componentSecreted SAAS SAAS020877
   Molecular functionCytokine SAAS SAAS000975
Gene Ontology (GO)
   Biological_processimmune response

Inferred from electronic annotation. Source: InterPro

inflammatory response

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular space

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9ESW2 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 81BA59003CBD295B

FASTA21223,990
        10         20         30         40         50         60 
MAKVPDLFED LKNCYSENEE YSSAIDHLSL NQKSFYDASY GSLHENCTDK FVSLRTSETS 

        70         80         90        100        110        120 
KMSTFTFKES RVVVSATSNK GKILKKRRLS FNQPFTEDDL EAIAHDLEVK FDMYAYSSGG 

       130        140        150        160        170        180 
DDSKYPVTLK VSNTQLFVSA QGEDKPVLLK EIPETPKLIT GSETDLIFFW EKINSKNYFT 

       190        200        210 
SAAFPELLIA TKEQSQVHLA RGLPSMIDFQ IS 

« Hide

References

[1]"Production of recombinant rat testis interleukin-1 alpha precursor form and discovery of a novel splice version lacking the calpain cleavage site."
Sultana T., Svechnikov K., Weber G., Soeder O.
Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Spraque Dawley EMBL CAC03996.1.
Tissue: Testis EMBL CAC03996.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ245643 mRNA. Translation: CAC03996.1.
UniGeneRn.12300.

3D structure databases

ProteinModelPortalQ9ESW2.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEQ9ESW2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD2890. Il1a.

Phylogenomic databases

HOGENOMHOG000113034.
HOVERGENHBG002432.

Gene expression databases

GenevestigatorQ9ESW2.

Family and domain databases

InterProIPR008996. Cytokine_IL1-like.
IPR003295. IL-1_alpha.
IPR020877. IL-1_CS.
IPR000975. IL-1_fam.
IPR003502. IL-1_propep.
[Graphical view]
PANTHERPTHR11420. PTHR11420. 1 hit.
PfamPF00340. IL1. 1 hit.
PF02394. IL1_propep. 1 hit.
[Graphical view]
PRINTSPR00264. INTERLEUKIN1.
PR01358. INTRLEUKIN1A.
SUPFAMSSF50353. SSF50353. 1 hit.
PROSITEPS00253. INTERLEUKIN_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9ESW2_RAT
AccessionPrimary (citable) accession number: Q9ESW2
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: May 14, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)