Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q9ERN5 (Q9ERN5_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 59. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Fibroblast growth factor RuleBase RU049442

Short name=FGF RuleBase RU049442
Gene names
Name:Fgf7 RGD 61805
OrganismRattus norvegicus (Rat) EMBL AAG31597.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length185 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the heparin-binding growth factors family. RuleBase RU049442

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue1851 EMBL AAG31597.1

Sequences

Sequence LengthMass (Da)Tools
Q9ERN5 [UniParc].

Last modified March 1, 2001. Version 1.
Checksum: 8DBE8364C9222B88

FASTA18521,342
        10         20         30         40         50         60 
MRKWILTRIL PTPLYRSCFH LVCLVGTISL ACNDMSPEQT ATSVNCSSPE RHTRSYDYME 

        70         80         90        100        110        120 
GGDIRVRRLF CRTQWYLRID KRGKVKGTQE MRNSYNIMEI RTVAVGIVAI KGVESEYYLA 

       130        140        150        160        170        180 
MNKEGKLYAK KECNEDCNFK ELILENHYNT YASAKWTHSG GEMFVALNQK GLPVKGKKTK 


KXXKT 

« Hide

References

[1]"Novel CD44 Splice Variants Associated with Changes in Alternative Splicing of FGFR-2 and Expression of FGF-2, FGF-7, E-Cadherin and Snail."
Choi J.K.W., Gibbins J.R., Hunter N., Lyons J.G., Tazawa M.Y., Walker D.M.
Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Dark Aguti EMBL AAG31597.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF295300 mRNA. Translation: AAG31597.1.
UniGeneRn.98842.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

RGD61805. Fgf7.

Phylogenomic databases

HOVERGENHBG007580.
InParanoidQ9ERN5.

Gene expression databases

GenevestigatorQ9ERN5.

Family and domain databases

InterProIPR008996. Cytokine_IL1-like.
IPR028247. FGF7.
IPR002209. Fibroblast_GF_fam.
IPR028142. IL-1_fam/FGF_fam.
[Graphical view]
PANTHERPTHR11486. PTHR11486. 1 hit.
PTHR11486:SF20. PTHR11486:SF20. 1 hit.
PfamPF00167. FGF. 1 hit.
[Graphical view]
PRINTSPR00263. HBGFFGF.
PR00262. IL1HBGF.
SMARTSM00442. FGF. 1 hit.
[Graphical view]
SUPFAMSSF50353. SSF50353. 1 hit.
PROSITEPS00247. HBGF_FGF. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9ERN5_RAT
AccessionPrimary (citable) accession number: Q9ERN5
Entry history
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: January 22, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)