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Q9ERN5

- Q9ERN5_RAT

UniProt

Q9ERN5 - Q9ERN5_RAT

Protein

Fibroblast growth factor

Gene

Fgf7

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 60 (01 Oct 2014)
      Sequence version 1 (01 Mar 2001)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. fibroblast growth factor receptor signaling pathway Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Fibroblast growth factorUniRule annotation
    Short name:
    FGFUniRule annotation
    Gene namesi
    Name:Fgf7Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi61805. Fgf7.

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: InterPro

    Expressioni

    Gene expression databases

    GenevestigatoriQ9ERN5.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the heparin-binding growth factors family.UniRule annotation

    Keywords - Domaini

    SignalUniRule annotation

    Phylogenomic databases

    HOVERGENiHBG007580.
    InParanoidiQ9ERN5.

    Family and domain databases

    InterProiIPR008996. Cytokine_IL1-like.
    IPR028247. FGF7.
    IPR002209. Fibroblast_GF_fam.
    IPR028142. IL-1_fam/FGF_fam.
    [Graphical view]
    PANTHERiPTHR11486. PTHR11486. 1 hit.
    PTHR11486:SF20. PTHR11486:SF20. 1 hit.
    PfamiPF00167. FGF. 1 hit.
    [Graphical view]
    PRINTSiPR00263. HBGFFGF.
    PR00262. IL1HBGF.
    SMARTiSM00442. FGF. 1 hit.
    [Graphical view]
    SUPFAMiSSF50353. SSF50353. 1 hit.
    PROSITEiPS00247. HBGF_FGF. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    Q9ERN5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRKWILTRIL PTPLYRSCFH LVCLVGTISL ACNDMSPEQT ATSVNCSSPE    50
    RHTRSYDYME GGDIRVRRLF CRTQWYLRID KRGKVKGTQE MRNSYNIMEI 100
    RTVAVGIVAI KGVESEYYLA MNKEGKLYAK KECNEDCNFK ELILENHYNT 150
    YASAKWTHSG GEMFVALNQK GLPVKGKKTK KXXKT 185
    Length:185
    Mass (Da):21,342
    Last modified:March 1, 2001 - v1
    Checksum:i8DBE8364C9222B88
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei185 – 1851Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF295300 mRNA. Translation: AAG31597.1.
    UniGeneiRn.98842.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF295300 mRNA. Translation: AAG31597.1 .
    UniGenei Rn.98842.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Organism-specific databases

    RGDi 61805. Fgf7.

    Phylogenomic databases

    HOVERGENi HBG007580.
    InParanoidi Q9ERN5.

    Gene expression databases

    Genevestigatori Q9ERN5.

    Family and domain databases

    InterProi IPR008996. Cytokine_IL1-like.
    IPR028247. FGF7.
    IPR002209. Fibroblast_GF_fam.
    IPR028142. IL-1_fam/FGF_fam.
    [Graphical view ]
    PANTHERi PTHR11486. PTHR11486. 1 hit.
    PTHR11486:SF20. PTHR11486:SF20. 1 hit.
    Pfami PF00167. FGF. 1 hit.
    [Graphical view ]
    PRINTSi PR00263. HBGFFGF.
    PR00262. IL1HBGF.
    SMARTi SM00442. FGF. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50353. SSF50353. 1 hit.
    PROSITEi PS00247. HBGF_FGF. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Novel CD44 Splice Variants Associated with Changes in Alternative Splicing of FGFR-2 and Expression of FGF-2, FGF-7, E-Cadherin and Snail."
      Choi J.K.W., Gibbins J.R., Hunter N., Lyons J.G., Tazawa M.Y., Walker D.M.
      Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Dark AgutiImported.

    Entry informationi

    Entry nameiQ9ERN5_RAT
    AccessioniPrimary (citable) accession number: Q9ERN5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2001
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 60 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)