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Protein
Submitted name:

CD44 isoform v3

Gene

Cd44

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
CD44 isoform v3Imported
Gene namesi
Name:Cd44Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi2307. Cd44.

Expressioni

Gene expression databases

GenevestigatoriQ9ERN3.

Sequencei

Sequence statusi: Fragment.

Q9ERN3-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
TESNTNPTGW KPNEENEDET DKYPNFSGSG IDDDEDFISS TSDGDSSMDP
60 70 80 90
RGGFDTVTHG SELAGHSSGN QDSGVTTTSG PARRPQIPEW LIIL
Length:94
Mass (Da):10,061
Last modified:March 1, 2001 - v1
Checksum:i96F9BAB480AD9378
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei94 – 941Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF295361 mRNA. Translation: AAG31600.1.
UniGeneiRn.1120.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF295361 mRNA. Translation: AAG31600.1.
UniGeneiRn.1120.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

RGDi2307. Cd44.

Gene expression databases

GenevestigatoriQ9ERN3.

Family and domain databases

ProtoNetiSearch...

Publicationsi

  1. "Novel CD44 Splice Variants Associated with Changes in Alternative Splicing of FGFR-2 and Expression of FGF-2, FGF-7, E-Cadherin and Snail."
    Choi J.K.W., Gibbins J.R., Hunter N., Lyons J.G., Tazawa M.Y., Walker D.M.
    Submitted (AUG-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Dark AgutiImported.

Entry informationi

Entry nameiQ9ERN3_RAT
AccessioniPrimary (citable) accession number: Q9ERN3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: October 29, 2014
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.