Q9ERE0 (Q9ERE0_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Thymus and activation-regulated chemokine EMBL AAG31159.1

Gene names

Name:

Ccl17 RGD 619924

Organism

Rattus norvegicus (Rat) EMBL AAG31159.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	93 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Cytokine SAAS SAAS000827
PTM	Disulfide bond SAAS SAAS000827
Gene Ontology (GO)
Biological_process	immune response Inferred from electronic annotation. Source: InterPro
Cellular_component	extracellular space Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q9ERE0 [UniParc]. Last modified March 1, 2001. Version 1. Checksum: 7274345889EE4889	FASTA	93	10,480
	10 20 30 40 50 60 MMSLQMLLLA ALLLGTSLQH ASAARATNVG RECCLDYFKG AIPIRKLVTW FRTSVECPKD 70 80 90 AIVFETVQGR LICTDPKDKH VKKAIRHLKN QRL

References

[1]	"cDNA cloning and analysis of tissue-specific mRNA expression of rat thymus-and activation-regulated chemokine." Park J.H., Ju S.K. Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Sprague-Dawley EMBL AAG31159.1. Tissue: Thymus EMBL AAG31159.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF312687 mRNA. Translation: AAG31159.1.
IPI	IPI00190856.
RefSeq	NP_476492.1. NM_057151.1.
UniGene	Rn.46679.
3D structure databases
HSSP	HSSP built from PDB template 1F2L based on UniProtKB P78423.
ProteinModelPortal	Q9ERE0.
SMR	Q9ERE0. Positions 25-90.
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000021842.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	117518.
KEGG	rno:117518.
UCSC	RGD:619924. rat.
Organism-specific databases
CTD	6361.
RGD	619924. Ccl17.
Phylogenomic databases
eggNOG	NOG45053.
HOGENOM	HOG000036685.
HOVERGEN	HBG098492.
InParanoid	Q9ERE0.
KO	K05514.
OrthoDB	EOG451DSD.
Gene expression databases
Genevestigator	Q9ERE0.
Family and domain databases
InterPro	IPR000827. Chemokine_CC_CS. IPR001811. Chemokine_IL8-like_dom. [Graphical view]
Pfam	PF00048. IL8. 1 hit. [Graphical view]
SMART	SM00199. SCY. 1 hit. [Graphical view]
SUPFAM	SSF54117. Chemokine_IL8. 1 hit.
PROSITE	PS00472. SMALL_CYTOKINES_CC. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	620283.

Entry information

Entry name

Q9ERE0_RAT

Accession

Primary (citable) accession number: Q9ERE0

Entry history

Integrated into UniProtKB/TrEMBL:	March 1, 2001
Last sequence update:	March 1, 2001
Last modified:	April 3, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)