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Q9ERE0

- Q9ERE0_RAT

UniProt

Q9ERE0 - Q9ERE0_RAT

Protein

C-C motif chemokine

Gene

Ccl17

Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. CCR4 chemokine receptor binding Source: RGD

    GO - Biological processi

    1. cell chemotaxis Source: GOC
    2. immune response Source: InterPro

    Keywords - Molecular functioni

    CytokineUniRule annotationSAAS annotation

    Keywords - Biological processi

    ChemotaxisUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    C-C motif chemokineUniRule annotation
    Gene namesi
    Name:Ccl17Imported
    OrganismiRattus norvegicus (Rat)Imported
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

    Organism-specific databases

    RGDi619924. Ccl17.

    Subcellular locationi

    Secreted UniRule annotation

    GO - Cellular componenti

    1. extracellular space Source: UniProtKB-KW

    Keywords - Cellular componenti

    SecretedUniRule annotation

    PTM / Processingi

    Keywords - PTMi

    Disulfide bondSAAS annotation

    Expressioni

    Gene expression databases

    GenevestigatoriQ9ERE0.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000021842.

    Structurei

    3D structure databases

    ProteinModelPortaliQ9ERE0.
    SMRiQ9ERE0. Positions 25-90.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the intercrine beta (chemokine CC) family.UniRule annotation

    Keywords - Domaini

    SignalUniRule annotation

    Phylogenomic databases

    eggNOGiNOG45053.
    HOGENOMiHOG000036685.
    HOVERGENiHBG098492.
    InParanoidiQ9ERE0.
    KOiK05514.
    PhylomeDBiQ9ERE0.

    Family and domain databases

    InterProiIPR000827. Chemokine_CC_CS.
    IPR001811. Chemokine_IL8-like_dom.
    [Graphical view]
    PfamiPF00048. IL8. 1 hit.
    [Graphical view]
    SMARTiSM00199. SCY. 1 hit.
    [Graphical view]
    SUPFAMiSSF54117. SSF54117. 1 hit.
    PROSITEiPS00472. SMALL_CYTOKINES_CC. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q9ERE0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MMSLQMLLLA ALLLGTSLQH ASAARATNVG RECCLDYFKG AIPIRKLVTW   50
    FRTSVECPKD AIVFETVQGR LICTDPKDKH VKKAIRHLKN QRL 93
    Length:93
    Mass (Da):10,480
    Last modified:March 1, 2001 - v1
    Checksum:i7274345889EE4889
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF312687 mRNA. Translation: AAG31159.1.
    RefSeqiNP_476492.1. NM_057151.1.
    UniGeneiRn.46679.

    Genome annotation databases

    GeneIDi117518.
    KEGGirno:117518.
    UCSCiRGD:619924. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF312687 mRNA. Translation: AAG31159.1 .
    RefSeqi NP_476492.1. NM_057151.1.
    UniGenei Rn.46679.

    3D structure databases

    ProteinModelPortali Q9ERE0.
    SMRi Q9ERE0. Positions 25-90.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000021842.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 117518.
    KEGGi rno:117518.
    UCSCi RGD:619924. rat.

    Organism-specific databases

    CTDi 6361.
    RGDi 619924. Ccl17.

    Phylogenomic databases

    eggNOGi NOG45053.
    HOGENOMi HOG000036685.
    HOVERGENi HBG098492.
    InParanoidi Q9ERE0.
    KOi K05514.
    PhylomeDBi Q9ERE0.

    Miscellaneous databases

    NextBioi 620283.

    Gene expression databases

    Genevestigatori Q9ERE0.

    Family and domain databases

    InterProi IPR000827. Chemokine_CC_CS.
    IPR001811. Chemokine_IL8-like_dom.
    [Graphical view ]
    Pfami PF00048. IL8. 1 hit.
    [Graphical view ]
    SMARTi SM00199. SCY. 1 hit.
    [Graphical view ]
    SUPFAMi SSF54117. SSF54117. 1 hit.
    PROSITEi PS00472. SMALL_CYTOKINES_CC. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "cDNA cloning and analysis of tissue-specific mRNA expression of rat thymus-and activation-regulated chemokine."
      Park J.H., Ju S.K.
      Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Sprague-DawleyImported.
      Tissue: ThymusImported.

    Entry informationi

    Entry nameiQ9ERE0_RAT
    AccessioniPrimary (citable) accession number: Q9ERE0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 1, 2001
    Last sequence update: March 1, 2001
    Last modified: October 1, 2014
    This is version 77 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)