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Q9ERE0

- Q9ERE0_RAT

UniProt

Q9ERE0 - Q9ERE0_RAT

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Protein
Submitted name: Thymus and activation-regulated chemokine
Gene
Ccl17
Organism
Rattus norvegicus (Rat)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. CCR4 chemokine receptor binding Source: RGD
Complete GO annotation...

GO - Biological processi

  1. cell chemotaxis Source: GOC
  2. immune response Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

CytokineSAAS annotations

Names & Taxonomyi

Protein namesi
Submitted name:
Thymus and activation-regulated chemokineImported
Gene namesi
Name:Ccl17Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi619924. Ccl17.

Subcellular locationi

GO - Cellular componenti

  1. extracellular space Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotations

Expressioni

Gene expression databases

GenevestigatoriQ9ERE0.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000021842.

Structurei

3D structure databases

ProteinModelPortaliQ9ERE0.
SMRiQ9ERE0. Positions 25-90.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG45053.
HOGENOMiHOG000036685.
HOVERGENiHBG098492.
InParanoidiQ9ERE0.
KOiK05514.
PhylomeDBiQ9ERE0.

Family and domain databases

InterProiIPR000827. Chemokine_CC_CS.
IPR001811. Chemokine_IL8-like_dom.
[Graphical view]
PfamiPF00048. IL8. 1 hit.
[Graphical view]
SMARTiSM00199. SCY. 1 hit.
[Graphical view]
SUPFAMiSSF54117. SSF54117. 1 hit.
PROSITEiPS00472. SMALL_CYTOKINES_CC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ERE0-1 [UniParc]FASTAAdd to Basket

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MMSLQMLLLA ALLLGTSLQH ASAARATNVG RECCLDYFKG AIPIRKLVTW   50
FRTSVECPKD AIVFETVQGR LICTDPKDKH VKKAIRHLKN QRL 93
Length:93
Mass (Da):10,480
Last modified:March 1, 2001 - v1
Checksum:i7274345889EE4889
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF312687 mRNA. Translation: AAG31159.1.
RefSeqiNP_476492.1. NM_057151.1.
UniGeneiRn.46679.

Genome annotation databases

GeneIDi117518.
KEGGirno:117518.
UCSCiRGD:619924. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AF312687 mRNA. Translation: AAG31159.1 .
RefSeqi NP_476492.1. NM_057151.1.
UniGenei Rn.46679.

3D structure databases

ProteinModelPortali Q9ERE0.
SMRi Q9ERE0. Positions 25-90.
ModBasei Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000021842.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 117518.
KEGGi rno:117518.
UCSCi RGD:619924. rat.

Organism-specific databases

CTDi 6361.
RGDi 619924. Ccl17.

Phylogenomic databases

eggNOGi NOG45053.
HOGENOMi HOG000036685.
HOVERGENi HBG098492.
InParanoidi Q9ERE0.
KOi K05514.
PhylomeDBi Q9ERE0.

Miscellaneous databases

NextBioi 620283.

Gene expression databases

Genevestigatori Q9ERE0.

Family and domain databases

InterProi IPR000827. Chemokine_CC_CS.
IPR001811. Chemokine_IL8-like_dom.
[Graphical view ]
Pfami PF00048. IL8. 1 hit.
[Graphical view ]
SMARTi SM00199. SCY. 1 hit.
[Graphical view ]
SUPFAMi SSF54117. SSF54117. 1 hit.
PROSITEi PS00472. SMALL_CYTOKINES_CC. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "cDNA cloning and analysis of tissue-specific mRNA expression of rat thymus-and activation-regulated chemokine."
    Park J.H., Ju S.K.
    Submitted (OCT-2000) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: Sprague-DawleyImported.
    Tissue: ThymusImported.

Entry informationi

Entry nameiQ9ERE0_RAT
AccessioniPrimary (citable) accession number: Q9ERE0
Entry historyi
Integrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 9, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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