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Protein

C-C motif chemokine

Gene

Ccl17

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • CCR4 chemokine receptor binding Source: RGD
  • chemokine activity Source: InterPro

GO - Biological processi

Keywordsi

Molecular functionCytokineUniRule annotationSAAS annotation
Biological processChemotaxisUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
C-C motif chemokineUniRule annotation
Gene namesi
Name:Ccl17Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Organism-specific databases

RGDi619924. Ccl17.

Subcellular locationi

  • Secreted UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

SecretedUniRule annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23UniRule annotationAdd BLAST23
ChainiPRO_500514478524 – 93C-C motif chemokineUniRule annotationAdd BLAST70

Proteomic databases

PaxDbiQ9ERE0.

Expressioni

Gene expression databases

GenevisibleiQ9ERE0. RN.

Interactioni

GO - Molecular functioni

  • CCR4 chemokine receptor binding Source: RGD
  • chemokine activity Source: InterPro

Structurei

3D structure databases

ProteinModelPortaliQ9ERE0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini30 – 88SCYInterPro annotationAdd BLAST59

Sequence similaritiesi

Belongs to the intercrine beta (chemokine CC) family.UniRule annotationSAAS annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

eggNOGiENOG410J0QF. Eukaryota.
ENOG41113EM. LUCA.
HOGENOMiHOG000036685.
HOVERGENiHBG098492.
KOiK21083.
PhylomeDBiQ9ERE0.

Family and domain databases

InterProiView protein in InterPro
IPR000827. Chemokine_CC_CS.
IPR001811. Chemokine_IL8-like_dom.
PfamiView protein in Pfam
PF00048. IL8. 1 hit.
SMARTiView protein in SMART
SM00199. SCY. 1 hit.
SUPFAMiSSF54117. SSF54117. 1 hit.
PROSITEiView protein in PROSITE
PS00472. SMALL_CYTOKINES_CC. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ERE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMSLQMLLLA ALLLGTSLQH ASAARATNVG RECCLDYFKG AIPIRKLVTW
60 70 80 90
FRTSVECPKD AIVFETVQGR LICTDPKDKH VKKAIRHLKN QRL
Length:93
Mass (Da):10,480
Last modified:March 1, 2001 - v1
Checksum:i7274345889EE4889
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF312687 mRNA. Translation: AAG31159.1.
RefSeqiNP_476492.1. NM_057151.1.
UniGeneiRn.46679.

Genome annotation databases

GeneIDi117518.
KEGGirno:117518.
UCSCiRGD:619924. rat.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9ERE0_RAT
AccessioniPrimary (citable) accession number: Q9ERE0
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 5, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)