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Protein
Submitted name:

E74-like ETS transcription factor 1

Gene

Elf1

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • regulation of transcription, DNA-templated Source: RGD

Keywordsi

Molecular functionDNA-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
E74-like ETS transcription factor 1Imported
Submitted name:
E74-like factor 1, isoform CRA_aImported
Submitted name:
Transcription factor Elf-1Imported
Gene namesi
Name:Elf1Imported
Synonyms:elf-1Imported
ORF Names:rCG_37183Imported
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 15

Organism-specific databases

RGDi620697. Elf1.

Subcellular locationi

  • Nucleus UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiQ9EQY2. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini171 – 253ETS DNA-bindingInterPro annotationAdd BLAST83

Sequence similaritiesi

Belongs to the ETS family.UniRule annotationSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00760000118996.
HOGENOMiHOG000049253.
HOVERGENiHBG007183.
KOiK09428.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiView protein in InterPro
IPR000418. Ets_dom.
IPR022084. TF_Elf_N.
IPR011991. WHTH_DNA-bd_dom.
PfamiView protein in Pfam
PF12310. Elf-1_N. 1 hit.
PF00178. Ets. 1 hit.
PRINTSiPR00454. ETSDOMAIN.
SMARTiView protein in SMART
SM00413. ETS. 1 hit.
SUPFAMiSSF46785. SSF46785. 1 hit.
PROSITEiView protein in PROSITE
PS00345. ETS_DOMAIN_1. 1 hit.
PS00346. ETS_DOMAIN_2. 1 hit.
PS50061. ETS_DOMAIN_3. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9EQY2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAVVQQNDL VFDFASNVME DEQQLGDPAI FPAVIVEHVP GADILNGYAG
60 70 80 90 100
LACVEEPNDM ITESSLDVAE EEIIEDDDDD ITLTDNNIFS SSEDDIVAPI
110 120 130 140 150
THVSVTLDGI PEVMETQQVQ ESNADSPGAS SPEQPKRKKG RKTKPPRPDS
160 170 180 190 200
PATTPNISVK KKSKDGKGNT IYLWEFLLAL LQDKATCPKY IKWTQREKGI
210 220 230 240 250
FKLVDSKAVS RLWGKHKNKP DMNYETMGRA LRYYYQRGIL AKVEGQRLVY
260 270 280 290 300
QFKEMPKDLI YIDDEGPSSS TESSDQSLSS TTTSSRNQAN RTRMSSSPGI
310 320 330 340 350
KGGATTILKP GNPKVAKPKD TVEVGQPSEV LRTVQPSQAP YPTQLFRTVH
360 370 380 390 400
VVQPVQAIPE EATITSTMQE EAAGSSVQGI RTIQASTQVP VVVSPGNQQL
410 420 430 440 450
HTVTLQTVPL TTVIASTDPS SGAGPQKFIL QAIPSSQPMT VLKENVLLQS
460 470 480 490 500
QKPGSPPSIV FSPTPVQQVL TGSVQSLGNG AVSMASPPNF SATAPVVTFS
510 520 530 540 550
RSSQLAAHPP GTVITSVIKA QETKTPKAEV EKKAEGHLNG DPEEIEQQPQ
560 570
PYVMVVSSSN GFSSQVAITQ NELLEPSSF
Length:579
Mass (Da):62,487
Last modified:March 1, 2001 - v1
Checksum:i495613AB618DD56A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC123280 Genomic DNA. No translation available.
AB030216 mRNA. Translation: BAB20034.1.
CH473951 Genomic DNA. Translation: EDM02359.1.
CH473951 Genomic DNA. Translation: EDM02363.1.
RefSeqiNP_445972.2. NM_053520.2.
XP_008769125.1. XM_008770903.2.
UniGeneiRn.98640.

Genome annotation databases

EnsembliENSRNOT00000084005; ENSRNOP00000072421; ENSRNOG00000011762.
GeneIDi85424.
KEGGirno:85424.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ9EQY2_RAT
AccessioniPrimary (citable) accession number: Q9EQY2
Entry historyiIntegrated into UniProtKB/TrEMBL: March 1, 2001
Last sequence update: March 1, 2001
Last modified: July 5, 2017
This is version 115 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported